Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040381.1-P | Field mustard | nucleus | 95.02 | 95.02 |
| CDY48227 | Canola | nucleus | 95.02 | 95.02 |
| AT1G36060.1 | Thale cress | nucleus | 76.95 | 78.66 |
| CDY38238 | Canola | nucleus | 40.19 | 49.62 |
| CDY14636 | Canola | nucleus, plastid | 38.32 | 49.2 |
| CDY21346 | Canola | nucleus | 39.56 | 48.85 |
| CDY08817 | Canola | mitochondrion | 18.69 | 48.78 |
| TraesCS7D01G469200.1 | Wheat | nucleus | 24.61 | 47.31 |
| CDX87480 | Canola | nucleus | 39.56 | 46.52 |
| GSMUA_Achr3P04360_001 | Banana | nucleus | 35.2 | 45.2 |
| CDY26847 | Canola | nucleus | 41.12 | 42.44 |
| CDX68032 | Canola | nucleus | 42.37 | 42.37 |
| GSMUA_Achr6P10440_001 | Banana | nucleus | 34.27 | 42.15 |
| GSMUA_Achr10P... | Banana | nucleus | 36.45 | 41.94 |
| CDX88414 | Canola | nucleus | 41.74 | 41.74 |
| CDX79244 | Canola | nucleus | 42.99 | 41.32 |
| CDY31606 | Canola | nucleus | 32.71 | 40.38 |
| CDX72672 | Canola | nucleus | 31.78 | 39.69 |
| Os08t0408500-01 | Rice | nucleus | 34.58 | 39.64 |
| CDX90362 | Canola | nucleus | 31.78 | 39.53 |
| TraesCS4B01G268100.1 | Wheat | nucleus | 32.4 | 39.39 |
| Zm00001d052229_P001 | Maize | nucleus | 38.63 | 39.24 |
| HORVU5Hr1G058270.1 | Barley | nucleus | 34.58 | 39.22 |
| EES13814 | Sorghum | nucleus | 33.02 | 39.11 |
| TraesCS5D01G200900.2 | Wheat | nucleus | 34.58 | 39.08 |
| Os03t0191900-01 | Rice | nucleus | 36.14 | 39.06 |
| Zm00001d032295_P001 | Maize | nucleus | 31.78 | 38.93 |
| TraesCS4D01G267500.1 | Wheat | nucleus | 33.96 | 38.79 |
| Zm00001d020267_P001 | Maize | nucleus | 35.51 | 38.51 |
| GSMUA_Achr3P01650_001 | Banana | nucleus | 39.56 | 38.48 |
| TraesCS5B01G193200.1 | Wheat | nucleus | 33.96 | 38.38 |
| CDY39455 | Canola | nucleus | 32.09 | 38.29 |
| CDX69387 | Canola | nucleus | 31.46 | 38.26 |
| KXG35507 | Sorghum | nucleus | 36.14 | 38.16 |
| TraesCS6A01G301900.1 | Wheat | nucleus | 38.94 | 38.11 |
| TraesCS4A01G035400.2 | Wheat | nucleus | 33.33 | 38.08 |
| Zm00001d048208_P001 | Maize | nucleus | 35.2 | 38.05 |
| CDY42004 | Canola | nucleus | 31.15 | 37.88 |
| Os02t0752800-01 | Rice | nucleus | 39.88 | 37.87 |
| TraesCS6B01G331000.1 | Wheat | nucleus | 39.25 | 37.84 |
| Zm00001d018081_P001 | Maize | nucleus | 40.19 | 37.83 |
| EES07235 | Sorghum | nucleus | 38.94 | 37.76 |
| Zm00001d028017_P001 | Maize | nucleus | 35.2 | 37.67 |
| HORVU6Hr1G074970.1 | Barley | nucleus | 38.63 | 37.58 |
| TraesCS6D01G281200.1 | Wheat | nucleus | 38.94 | 37.54 |
| HORVU6Hr1G060220.1 | Barley | nucleus | 28.66 | 37.25 |
| CDX89442 | Canola | plastid | 26.79 | 36.91 |
| CDY33983 | Canola | nucleus | 31.15 | 36.36 |
| CDY14542 | Canola | nucleus | 31.78 | 36.17 |
| CDY08816 | Canola | nucleus | 31.78 | 36.17 |
| EER92713 | Sorghum | nucleus | 35.2 | 35.65 |
| Zm00001d030513_P001 | Maize | mitochondrion | 30.53 | 35.64 |
| CDY25578 | Canola | plastid | 26.17 | 35.59 |
| HORVU4Hr1G071890.3 | Barley | nucleus | 29.59 | 34.42 |
| TraesCS7D01G182700.1 | Wheat | nucleus, plastid | 38.94 | 34.15 |
| TraesCS7A01G180900.1 | Wheat | nucleus, plastid | 38.32 | 33.98 |
| TraesCS7B01G085900.1 | Wheat | nucleus, plastid | 38.94 | 33.97 |
| CDY31284 | Canola | nucleus | 29.28 | 33.81 |
| Zm00001d044857_P001 | Maize | nucleus | 36.45 | 33.52 |
| GSMUA_Achr9P12950_001 | Banana | nucleus | 35.2 | 33.33 |
| HORVU7Hr1G037180.1 | Barley | nucleus, plastid | 38.32 | 33.15 |
| EER89448 | Sorghum | nucleus | 37.69 | 32.97 |
| CDY65537 | Canola | mitochondrion | 16.51 | 30.81 |
| CDX88163 | Canola | mitochondrion | 16.2 | 29.71 |
| CDY19812 | Canola | mitochondrion | 16.2 | 29.05 |
| CDX87096 | Canola | mitochondrion | 16.2 | 28.73 |
| CDY36551 | Canola | nucleus | 16.2 | 28.26 |
| CDX96845 | Canola | nucleus | 15.89 | 28.18 |
| CDX83982 | Canola | nucleus | 15.89 | 28.18 |
| CDY05479 | Canola | mitochondrion | 15.89 | 27.57 |
| CDY39637 | Canola | nucleus | 16.2 | 27.23 |
| CDY19805 | Canola | nucleus | 15.58 | 27.17 |
| CDY05373 | Canola | mitochondrion | 15.58 | 27.17 |
| CDX80507 | Canola | nucleus | 15.89 | 26.98 |
| CDY46525 | Canola | nucleus | 23.99 | 26.92 |
| CDY67940 | Canola | nucleus | 15.89 | 26.84 |
| Os10t0371100-00 | Rice | nucleus | 29.91 | 26.67 |
| CDX88176 | Canola | nucleus | 15.58 | 26.45 |
| CDY71425 | Canola | nucleus | 23.99 | 26.28 |
| CDY14255 | Canola | nucleus | 22.12 | 25.72 |
| CDX87089 | Canola | nucleus | 15.58 | 25.38 |
| CDY58717 | Canola | nucleus | 20.56 | 25.29 |
| CDY29884 | Canola | nucleus | 20.56 | 25.29 |
| CDY68539 | Canola | mitochondrion, nucleus | 14.64 | 25.27 |
| CDY47850 | Canola | nucleus | 23.99 | 25.25 |
| CDX69779 | Canola | nucleus | 14.64 | 25.13 |
| CDX97423 | Canola | nucleus | 21.81 | 25.09 |
| CDX81987 | Canola | nucleus | 23.36 | 23.96 |
| CDY19002 | Canola | nucleus | 21.81 | 23.89 |
| CDX89202 | Canola | nucleus | 21.5 | 23.55 |
| CDY69209 | Canola | nucleus | 22.43 | 23.15 |
| CDY53558 | Canola | nucleus | 24.3 | 22.35 |
| CDY08372 | Canola | nucleus | 8.72 | 11.91 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078C921 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX73367 |
| ProteinID:CDX73367 | ProteinID:CDX73367.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00106567001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EECF11 |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g27390D
Coordinates
chrLK031798:-:2515688..2516653
Molecular Weight (calculated)
35698.0 Da
IEP (calculated)
5.341
GRAVY (calculated)
-0.693
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MADFFGSSHG GELMEALQPF YKSASTFASD SAFVSSNAAF PSTPNDPFSF SYYNYQPQNI SSFSTTHSDY GSFPDIYPGS MTYPSSFPSD LQKQPDQNYQ
101: AQFHYQNDST NTHQDNHYTL NFVDPNNSDF LIQPDPVPSS GLVPKPTKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEEAALAYD RAAFKLRGDS
201: ARLNFPALRY QTGSSPSDIG VYYGPIQATV DAKLEAILAE PKNQPGKKER TSRNRAKATP SSIEHSTPQQ QSGSGESDGS GSPPSDMMAL EMCVETPIPW
301: NDNFILGKCP SYEIDWASIL S
101: AQFHYQNDST NTHQDNHYTL NFVDPNNSDF LIQPDPVPSS GLVPKPTKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEEAALAYD RAAFKLRGDS
201: ARLNFPALRY QTGSSPSDIG VYYGPIQATV DAKLEAILAE PKNQPGKKER TSRNRAKATP SSIEHSTPQQ QSGSGESDGS GSPPSDMMAL EMCVETPIPW
301: NDNFILGKCP SYEIDWASIL S
001: MADLFGGGHG GELMEALQPF YKSASTSASN PAFASSNDAF ASAPNDLFSS SSYYNPHASL FPSHSTTSYP DIYSGSMTYP SSFGSDLQQP ENYQSQFHYQ
101: NTITYTHQDN NTCMLNFIEP SQPGFMTQPG PSSGSVSKPA KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPA
201: LRYQTGSSPS DTGEYGPIQA AVDAKLEAIL AEPKNQPGKT ERTSRKRAKA AASSAEQPSA PQQHSGSGES DGSGSPTSDV MVQEMCQEPE MPWNENFMLG
301: KCPSYEIDWA SILS
101: NTITYTHQDN NTCMLNFIEP SQPGFMTQPG PSSGSVSKPA KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPA
201: LRYQTGSSPS DTGEYGPIQA AVDAKLEAIL AEPKNQPGKT ERTSRKRAKA AASSAEQPSA PQQHSGSGES DGSGSPTSDV MVQEMCQEPE MPWNENFMLG
301: KCPSYEIDWA SILS
Arabidopsis Description
ERF055Ethylene-responsive transcription factor ERF055 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.