Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024357.1-P | Field mustard | mitochondrion | 100.0 | 100.0 |
| CDY14542 | Canola | nucleus | 73.98 | 32.27 |
| CDY33983 | Canola | nucleus | 69.11 | 30.91 |
| CDY31284 | Canola | nucleus | 69.11 | 30.58 |
| CDY08816 | Canola | nucleus | 69.11 | 30.14 |
| AT5G65130.2 | Thale cress | nucleus | 68.29 | 30.11 |
| CDX89442 | Canola | plastid | 53.66 | 28.33 |
| CDY25578 | Canola | plastid | 52.03 | 27.12 |
| CDY14636 | Canola | nucleus, plastid | 50.41 | 24.8 |
| CDY31606 | Canola | nucleus | 52.03 | 24.62 |
| CDX90362 | Canola | nucleus | 51.22 | 24.42 |
| CDX83982 | Canola | nucleus | 35.77 | 24.31 |
| CDY38238 | Canola | nucleus | 51.22 | 24.23 |
| CDY21346 | Canola | nucleus | 51.22 | 24.23 |
| CDY36551 | Canola | nucleus | 35.77 | 23.91 |
| CDX96845 | Canola | nucleus | 34.96 | 23.76 |
| CDY39455 | Canola | nucleus | 50.41 | 23.05 |
| CDY39637 | Canola | nucleus | 35.77 | 23.04 |
| CDX72672 | Canola | nucleus | 47.97 | 22.96 |
| CDX87480 | Canola | nucleus | 50.41 | 22.71 |
| CDY67940 | Canola | nucleus | 34.96 | 22.63 |
| CDY19805 | Canola | nucleus | 33.33 | 22.28 |
| CDX80507 | Canola | nucleus | 34.15 | 22.22 |
| CDY68539 | Canola | mitochondrion, nucleus | 33.33 | 22.04 |
| CDX69387 | Canola | nucleus | 47.15 | 21.97 |
| CDX69779 | Canola | nucleus | 33.33 | 21.93 |
| CDX88163 | Canola | mitochondrion | 30.89 | 21.71 |
| CDY42004 | Canola | nucleus | 46.34 | 21.59 |
| CDY65537 | Canola | mitochondrion | 30.08 | 21.51 |
| CDX87089 | Canola | nucleus | 34.15 | 21.32 |
| CDY19812 | Canola | mitochondrion | 30.89 | 21.23 |
| CDX88176 | Canola | nucleus | 32.52 | 21.16 |
| CDX87096 | Canola | mitochondrion | 30.89 | 20.99 |
| CDY05373 | Canola | mitochondrion | 30.89 | 20.65 |
| CDY05479 | Canola | mitochondrion | 30.89 | 20.54 |
| CDY14255 | Canola | nucleus | 45.53 | 20.29 |
| CDX97423 | Canola | nucleus | 45.53 | 20.07 |
| CDY26847 | Canola | nucleus | 50.41 | 19.94 |
| CDY58717 | Canola | nucleus | 42.28 | 19.92 |
| CDX68032 | Canola | nucleus | 51.22 | 19.63 |
| CDY29884 | Canola | nucleus | 41.46 | 19.54 |
| CDX88414 | Canola | nucleus | 50.41 | 19.31 |
| CDX79244 | Canola | nucleus | 51.22 | 18.86 |
| CDY19002 | Canola | nucleus | 44.72 | 18.77 |
| CDX73367 | Canola | nucleus | 48.78 | 18.69 |
| CDX89202 | Canola | nucleus | 43.9 | 18.43 |
| CDY48227 | Canola | nucleus | 47.97 | 18.38 |
| CDX81987 | Canola | nucleus | 41.46 | 16.29 |
| CDY46525 | Canola | nucleus | 37.4 | 16.08 |
| CDY47850 | Canola | nucleus | 39.84 | 16.07 |
| CDY69209 | Canola | nucleus | 39.84 | 15.76 |
| CDY71425 | Canola | nucleus | 37.4 | 15.7 |
| CDY53558 | Canola | nucleus | 42.28 | 14.9 |
| CDY08372 | Canola | nucleus | 7.32 | 3.83 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078F6W0 | UniProt:A0A078F6W0 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY08817 | ProteinID:CDY08817 | ProteinID:CDY08817.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00000779001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000253F4F3 | SEG:seg | : | : |
Description
BnaA06g24070DBnaA06g24070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6W0]
Coordinates
chrLK031989:-:720613..721282
Molecular Weight (calculated)
14458.3 Da
IEP (calculated)
10.874
GRAVY (calculated)
-0.876
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKANVTRPV KLYRGVRQRQ WGKWVAEIRL PKHRTRLWLG TFKSAEEAAL AYDQAAHKIR GDNTRLNFPD IASRNRRKQW NGSLVFYYTV PKLEQEREIP
101: DSSGYGSPES NITMLDFSSQ WMK
101: DSSGYGSPES NITMLDFSSQ WMK
001: MAMALNMNAY VDEFMEALEP FMKVTSSSST SNSSNPKPLT PNFIPNNDQV LPVSNQTGPI GLNQLTPTQI LQIQTELHLR QNQSRRRAGS HLLTAKPTSM
101: KKIDVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAQEAAL AYDQAAHKIR GDNARLNFPD IVRQGHYKQI LSPSINAKIE SICNSSDLPL
201: PQIEKQNKTE EVLSGFSKPE KEPEFGEIYG CGYSGSSPES DITLLDFSSD CVKEDESFLM GLHKYPSLEI DWDAIEKLF
101: KKIDVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAQEAAL AYDQAAHKIR GDNARLNFPD IVRQGHYKQI LSPSINAKIE SICNSSDLPL
201: PQIEKQNKTE EVLSGFSKPE KEPEFGEIYG CGYSGSSPES DITLLDFSSD CVKEDESFLM GLHKYPSLEI DWDAIEKLF
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT5G65130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.