Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36551 | Canola | nucleus | 93.72 | 97.28 |
| CDX83982 | Canola | nucleus | 86.91 | 91.71 |
| CDX96845 | Canola | nucleus | 86.39 | 91.16 |
| Bra026140.1-P | Field mustard | nucleus | 94.24 | 90.91 |
| AT1G15360.1 | Thale cress | nucleus | 90.58 | 86.93 |
| CDY67940 | Canola | nucleus | 83.25 | 83.68 |
| GSMUA_Achr6P05210_001 | Banana | nucleus | 64.92 | 68.13 |
| PGSC0003DMT400001703 | Potato | nucleus | 70.16 | 65.05 |
| Solyc03g116610.2.1 | Tomato | nucleus | 68.59 | 64.85 |
| Zm00001d046501_P001 | Maize | nucleus | 65.44 | 57.6 |
| CDY68539 | Canola | mitochondrion, nucleus | 56.02 | 57.53 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 67.54 | 57.33 |
| CDX69779 | Canola | nucleus | 56.02 | 57.22 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 67.54 | 56.83 |
| TraesCS7A01G376300.1 | Wheat | nucleus | 67.54 | 56.83 |
| CDY19805 | Canola | nucleus | 53.93 | 55.98 |
| CDX88176 | Canola | nucleus | 54.97 | 55.56 |
| EER90018 | Sorghum | nucleus | 67.54 | 54.89 |
| CDX80507 | Canola | nucleus | 53.93 | 54.5 |
| Os06t0604000-02 | Rice | nucleus | 68.06 | 53.5 |
| Zm00001d036889_P001 | Maize | nucleus | 63.87 | 53.04 |
| CDX87089 | Canola | nucleus | 53.93 | 52.28 |
| CDY65537 | Canola | mitochondrion | 40.31 | 44.77 |
| CDY19812 | Canola | mitochondrion | 40.84 | 43.58 |
| CDX88163 | Canola | mitochondrion | 39.79 | 43.43 |
| CDX87096 | Canola | mitochondrion | 40.84 | 43.09 |
| CDY05479 | Canola | mitochondrion | 39.79 | 41.08 |
| CDY05373 | Canola | mitochondrion | 39.27 | 40.76 |
| CDY08817 | Canola | mitochondrion | 23.04 | 35.77 |
| CDY14636 | Canola | nucleus, plastid | 29.32 | 22.4 |
| CDX89442 | Canola | plastid | 27.23 | 22.32 |
| CDY25578 | Canola | plastid | 27.23 | 22.03 |
| CDX87480 | Canola | nucleus | 30.89 | 21.61 |
| CDY21346 | Canola | nucleus | 29.32 | 21.54 |
| CDY38238 | Canola | nucleus | 29.32 | 21.54 |
| CDX90362 | Canola | nucleus | 28.27 | 20.93 |
| CDY31606 | Canola | nucleus | 27.75 | 20.38 |
| CDY08816 | Canola | nucleus | 29.84 | 20.21 |
| CDY31284 | Canola | nucleus | 29.32 | 20.14 |
| CDX69387 | Canola | nucleus | 27.75 | 20.08 |
| CDY39455 | Canola | nucleus | 28.27 | 20.07 |
| CDY33983 | Canola | nucleus | 28.8 | 20.0 |
| CDY14542 | Canola | nucleus | 29.32 | 19.86 |
| CDX72672 | Canola | nucleus | 26.7 | 19.84 |
| CDY42004 | Canola | nucleus | 27.23 | 19.7 |
| CDY46525 | Canola | nucleus | 29.32 | 19.58 |
| CDY71425 | Canola | nucleus | 29.32 | 19.11 |
| CDX88414 | Canola | nucleus | 31.41 | 18.69 |
| CDX68032 | Canola | nucleus | 30.89 | 18.38 |
| CDY47850 | Canola | nucleus | 29.32 | 18.36 |
| CDY26847 | Canola | nucleus | 29.84 | 18.33 |
| CDX79244 | Canola | nucleus | 31.41 | 17.96 |
| CDY58717 | Canola | nucleus | 23.56 | 17.24 |
| CDY29884 | Canola | nucleus | 23.04 | 16.86 |
| CDX73367 | Canola | nucleus | 27.23 | 16.2 |
| CDY48227 | Canola | nucleus | 27.23 | 16.2 |
| CDX97423 | Canola | nucleus | 23.04 | 15.77 |
| CDY14255 | Canola | nucleus | 22.51 | 15.58 |
| CDY19002 | Canola | nucleus | 23.56 | 15.36 |
| CDX89202 | Canola | nucleus | 23.56 | 15.36 |
| CDX81987 | Canola | nucleus | 24.08 | 14.7 |
| CDY69209 | Canola | nucleus | 23.04 | 14.15 |
| CDY53558 | Canola | nucleus | 24.61 | 13.47 |
| CDY08372 | Canola | nucleus | 10.47 | 8.51 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:21.9.3.1 | Gene3D:3.30.730.10 | GO:A0A078HP60 | UniProt:A0A078HP60 | InterPro:AP2/ERF-transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY39637 | ProteinID:CDY39637 | ProteinID:CDY39637.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00068206001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 |
| PANTHER:PTHR31194:SF12 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF45C5 | SEG:seg | : |
Description
BnaC05g11660DBnaC05g11660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP60]
Coordinates
chrLK032453:+:197418..198238
Molecular Weight (calculated)
20829.1 Da
IEP (calculated)
7.444
GRAVY (calculated)
-0.665
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPVNNNNNN NTGDTSEGKT DISSSSSSSS SSSSSSLSSI
101: LSAKLRKCCK SPSPSLTCLR LDTASSHIGV WQKRAGSKSD SSWVMTVELG PASSSQEPTK NASQDDVGEE GVMDEEEKVA LQMIEELLNT N
101: LSAKLRKCCK SPSPSLTCLR LDTASSHIGV WQKRAGSKSD SSWVMTVELG PASSSQEPTK NASQDDVGEE GVMDEEEKVA LQMIEELLNT N
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
Arabidopsis Description
WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.