Factsheet for Os06t0604000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G277800.1	Wheat	nucleus	77.37	83.56
TraesCS7D01G372700.1	Wheat	nucleus	77.78	83.26
TraesCS7A01G376300.1	Wheat	nucleus	77.78	83.26
Zm00001d046501_P001	Maize	nucleus	69.96	78.34
Os02t0202000-01	Rice	nucleus	65.43	77.56
EER90018	Sorghum	nucleus	74.49	77.02
GSMUA_Achr6P05210_001	Banana	nucleus	56.38	75.27
CDY36551	Canola	nucleus	53.09	70.11
CDX96845	Canola	nucleus	51.85	69.61
CDX83982	Canola	nucleus	51.44	69.06
CDY39637	Canola	nucleus	53.5	68.06
Bra026140.1-P	Field mustard	nucleus	53.09	65.15
AT1G15360.1	Thale cress	nucleus	53.09	64.82
Bra016663.1-P	Field mustard	nucleus	53.09	64.5
Zm00001d036889_P001	Maize	nucleus	60.49	63.91
CDY67940	Canola	nucleus	49.79	63.68
PGSC0003DMT400001703	Potato	nucleus	51.85	61.16
Solyc03g116610.2.1	Tomato	nucleus	50.62	60.89
Bra026770.1-P	Field mustard	nucleus	42.8	60.82
Os02t0797100-00	Rice	mitochondrion	26.75	37.79
Os06t0181700-01	Rice	mitochondrion	26.75	36.52
Os04t0655700-00	Rice	nucleus	19.75	31.37
Os08t0408500-01	Rice	nucleus	20.58	17.86
Os03t0191900-01	Rice	nucleus	21.81	17.85
Os05t0572000-00	Rice	nucleus	18.52	16.48
Os02t0752800-01	Rice	nucleus	20.99	15.09
Os10t0371100-00	Rice	nucleus	18.93	12.78
Os04t0529100-01	Rice	nucleus	19.75	12.73
Os02t0638650-01	Rice	nucleus	21.4	10.99

Protein Annotations

MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	EntrezGene:4341466	ProteinID:ABS82040.1	EMBL:AK061163
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:BAD35470.1	ProteinID:BAS98513.1	InterPro:DNA-bd_dom_sf	ProteinID:EAZ37571.1
EMBL:FJ940222	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414
GO:GO:0009628	GO:GO:0009987	GO:GO:0010143	GO:GO:0010166	GO:GO:0043565	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlantsGene:Os06g0604000	EnsemblPlants:Os06t0604000-02	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF12	UniProt:Q69XI7	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00004037DA
RefSeq:XP_015641433.1	SEG:seg	:	:	:	:

Description

ETHYLENE RESPONSE FACTOR 1Similar to Ethylene response factor 1. (Os06t0604000-01);Ethylene response factor 3. (Os06t0604000-02)

Coordinates

chr6:-:23898257..23899816

Molecular Weight (calculated)

25397.9 Da

IEP (calculated)

10.032

GRAVY (calculated)

-0.408

Length

243 amino acids

Sequence
(BLAST)

001: MGQSKKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDEA AILMSGRNAK TNFPVARNAT GELTPAAAVA GRDGRVGGGS GSSSSMTANG
101: GGNSLSQILS AKLRKCCKTP SPSLTCLRLD PEKSHIGVWQ KRAGARADSS WVMTVELNKD TAVSSAATVA AATAVSSSDQ PTPSDSTVTT TSTSTTGSPS
201: PPPPAMDDEE RIALQMIEEL LGRSGPGSPS HGLLHGGEGS LVI

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.