Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026770.1-P | Field mustard | nucleus | 83.16 | 92.4 |
| CDY36551 | Canola | nucleus | 83.16 | 85.87 |
| CDX83982 | Canola | nucleus | 80.53 | 84.53 |
| CDX96845 | Canola | nucleus | 80.53 | 84.53 |
| CDY39637 | Canola | nucleus | 83.68 | 83.25 |
| AT1G15360.1 | Thale cress | nucleus | 83.16 | 79.4 |
| GSMUA_Achr6P05210_001 | Banana | nucleus | 61.58 | 64.29 |
| PGSC0003DMT400001703 | Potato | nucleus | 66.32 | 61.16 |
| Solyc03g116610.2.1 | Tomato | nucleus | 64.74 | 60.89 |
| CDY68539 | Canola | mitochondrion, nucleus | 54.21 | 55.38 |
| CDX69779 | Canola | nucleus | 54.21 | 55.08 |
| Zm00001d046501_P001 | Maize | nucleus | 62.63 | 54.84 |
| CDY19805 | Canola | nucleus | 52.63 | 54.35 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 63.68 | 53.78 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 63.68 | 53.3 |
| CDX88176 | Canola | nucleus | 52.63 | 52.91 |
| TraesCS7A01G376300.1 | Wheat | nucleus | 63.16 | 52.86 |
| CDX80507 | Canola | nucleus | 51.58 | 51.85 |
| EER90018 | Sorghum | nucleus | 63.68 | 51.49 |
| CDX87089 | Canola | nucleus | 52.63 | 50.76 |
| Os06t0604000-02 | Rice | nucleus | 63.68 | 49.79 |
| Zm00001d036889_P001 | Maize | nucleus | 59.47 | 49.13 |
| CDY65537 | Canola | mitochondrion | 38.42 | 42.44 |
| CDY19812 | Canola | mitochondrion | 38.95 | 41.34 |
| CDX88163 | Canola | mitochondrion | 37.89 | 41.14 |
| CDX87096 | Canola | mitochondrion | 38.95 | 40.88 |
| CDY05479 | Canola | mitochondrion | 37.89 | 38.92 |
| CDY05373 | Canola | mitochondrion | 37.37 | 38.59 |
| CDY08817 | Canola | mitochondrion | 22.63 | 34.96 |
| CDY14636 | Canola | nucleus, plastid | 28.95 | 22.0 |
| CDX89442 | Canola | plastid | 26.84 | 21.89 |
| CDY25578 | Canola | plastid | 26.84 | 21.61 |
| CDX87480 | Canola | nucleus | 30.53 | 21.25 |
| CDY21346 | Canola | nucleus | 28.95 | 21.15 |
| CDY38238 | Canola | nucleus | 28.95 | 21.15 |
| CDX90362 | Canola | nucleus | 27.89 | 20.54 |
| CDY08816 | Canola | nucleus | 30.0 | 20.21 |
| CDY31284 | Canola | nucleus | 29.47 | 20.14 |
| CDY33983 | Canola | nucleus | 28.95 | 20.0 |
| CDY14542 | Canola | nucleus | 29.47 | 19.86 |
| CDY39455 | Canola | nucleus | 27.89 | 19.7 |
| CDY31606 | Canola | nucleus | 26.84 | 19.62 |
| CDX72672 | Canola | nucleus | 26.32 | 19.46 |
| CDX69387 | Canola | nucleus | 26.84 | 19.32 |
| CDY42004 | Canola | nucleus | 26.32 | 18.94 |
| CDX88414 | Canola | nucleus | 31.05 | 18.38 |
| CDY46525 | Canola | nucleus | 27.37 | 18.18 |
| CDX68032 | Canola | nucleus | 30.53 | 18.07 |
| CDY26847 | Canola | nucleus | 29.47 | 18.01 |
| CDY71425 | Canola | nucleus | 27.37 | 17.75 |
| CDX79244 | Canola | nucleus | 31.05 | 17.66 |
| CDY47850 | Canola | nucleus | 27.37 | 17.05 |
| CDY58717 | Canola | nucleus | 23.16 | 16.86 |
| CDY29884 | Canola | nucleus | 22.63 | 16.48 |
| CDX73367 | Canola | nucleus | 26.84 | 15.89 |
| CDY48227 | Canola | nucleus | 26.84 | 15.89 |
| CDX97423 | Canola | nucleus | 22.63 | 15.41 |
| CDY14255 | Canola | nucleus | 22.11 | 15.22 |
| CDX89202 | Canola | nucleus | 23.16 | 15.02 |
| CDY19002 | Canola | nucleus | 22.63 | 14.68 |
| CDX81987 | Canola | nucleus | 23.68 | 14.38 |
| CDY69209 | Canola | nucleus | 22.63 | 13.83 |
| CDY53558 | Canola | nucleus | 24.21 | 13.18 |
| CDY08372 | Canola | nucleus | 8.42 | 6.81 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:21.9.3.1 | Gene3D:3.30.730.10 | GO:A0A078JN79 | UniProt:A0A078JN79 | InterPro:AP2/ERF-transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY67940 | ProteinID:CDY67940 | ProteinID:CDY67940.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00067708001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 |
| PANTHER:PTHR31194:SF24 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE34DC | SEG:seg | : |
Description
BnaCnng57070DBnaCnng57070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN79]
Coordinates
chrLK036674:-:292..1308
Molecular Weight (calculated)
20756.3 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.545
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE ESARAYDEAA VLISGRNANT NFPLKNNSTI DTSESKTDTS ASASSSLSSI LSAKLRKCCK
101: SSSPSLTCLR LDTTSSHIGV WQKRAGSKSD SSWVMTVELG PAGPSHEPTR KASLDDVGLA TEVGGGEEEG TMDEEEKVAL QMIEELLNTN
101: SSSPSLTCLR LDTTSSHIGV WQKRAGSKSD SSWVMTVELG PAGPSHEPTR KASLDDVGLA TEVGGGEEEG TMDEEEKVAL QMIEELLNTN
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
Arabidopsis Description
WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.