Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31284 | Canola | nucleus | 90.18 | 89.21 |
| CDY14542 | Canola | nucleus | 78.18 | 76.24 |
| CDY08816 | Canola | nucleus | 76.73 | 74.82 |
| CDY08817 | Canola | mitochondrion | 30.91 | 69.11 |
| AT5G65130.2 | Thale cress | nucleus | 69.82 | 68.82 |
| CDX90362 | Canola | nucleus | 45.45 | 48.45 |
| CDY31606 | Canola | nucleus | 45.45 | 48.08 |
| CDX72672 | Canola | nucleus | 43.64 | 46.69 |
| CDY39455 | Canola | nucleus | 45.09 | 46.1 |
| CDX69387 | Canola | nucleus | 43.27 | 45.08 |
| CDY42004 | Canola | nucleus | 42.91 | 44.7 |
| CDX89442 | Canola | plastid | 37.45 | 44.21 |
| CDY14636 | Canola | nucleus, plastid | 39.27 | 43.2 |
| CDY25578 | Canola | plastid | 36.36 | 42.37 |
| CDY21346 | Canola | nucleus | 39.27 | 41.54 |
| CDY38238 | Canola | nucleus | 39.27 | 41.54 |
| CDX87480 | Canola | nucleus | 40.36 | 40.66 |
| CDY26847 | Canola | nucleus | 44.73 | 39.55 |
| CDX68032 | Canola | nucleus | 42.91 | 36.76 |
| CDX88414 | Canola | nucleus | 42.91 | 36.76 |
| CDX79244 | Canola | nucleus | 43.27 | 35.63 |
| CDY48227 | Canola | nucleus | 37.09 | 31.78 |
| CDX73367 | Canola | nucleus | 36.36 | 31.15 |
| CDX96845 | Canola | nucleus | 20.0 | 30.39 |
| CDX83982 | Canola | nucleus | 20.0 | 30.39 |
| CDY36551 | Canola | nucleus | 20.0 | 29.89 |
| CDX88163 | Canola | mitochondrion | 18.91 | 29.71 |
| CDY65537 | Canola | mitochondrion | 18.55 | 29.65 |
| CDY19812 | Canola | mitochondrion | 19.27 | 29.61 |
| CDX87096 | Canola | mitochondrion | 19.27 | 29.28 |
| CDY67940 | Canola | nucleus | 20.0 | 28.95 |
| CDY05373 | Canola | mitochondrion | 19.27 | 28.8 |
| CDY39637 | Canola | nucleus | 20.0 | 28.8 |
| CDY05479 | Canola | mitochondrion | 19.27 | 28.65 |
| CDY46525 | Canola | nucleus | 28.36 | 27.27 |
| CDY47850 | Canola | nucleus | 29.82 | 26.89 |
| CDY19805 | Canola | nucleus | 17.82 | 26.63 |
| CDY71425 | Canola | nucleus | 28.36 | 26.62 |
| CDY68539 | Canola | mitochondrion, nucleus | 17.45 | 25.81 |
| CDX69779 | Canola | nucleus | 17.45 | 25.67 |
| CDX88176 | Canola | nucleus | 17.45 | 25.4 |
| CDX80507 | Canola | nucleus | 17.45 | 25.4 |
| CDX87089 | Canola | nucleus | 17.82 | 24.87 |
| CDY53558 | Canola | nucleus | 30.18 | 23.78 |
| CDX97423 | Canola | nucleus | 22.91 | 22.58 |
| CDY14255 | Canola | nucleus | 22.55 | 22.46 |
| CDX89202 | Canola | nucleus | 23.27 | 21.84 |
| CDY19002 | Canola | nucleus | 22.91 | 21.5 |
| CDY29884 | Canola | nucleus | 20.36 | 21.46 |
| CDY58717 | Canola | nucleus | 20.36 | 21.46 |
| CDX81987 | Canola | nucleus | 24.0 | 21.09 |
| CDY69209 | Canola | nucleus | 22.91 | 20.26 |
| CDY08372 | Canola | nucleus | 12.0 | 14.04 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078HAW4 | UniProt:A0A078HAW4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY33983 | ProteinID:CDY33983 | ProteinID:CDY33983.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00055831001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEAF7B | SEG:seg | : | : | : | : |
Description
BnaC02g43540DBnaC02g43540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAW4]
Coordinates
chrLK032325:-:284418..285245
Molecular Weight (calculated)
31190.8 Da
IEP (calculated)
6.972
GRAVY (calculated)
-0.681
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVALNMNGY TEEFMQALES FMKVTTSSSS SSPSSSKQEP LTPNNQTGPI GLNQLTPTQI LQIQRELHLR QNQAHRRGDS AHNLHLLNAK PVLMKKTDVT
101: TPVKLYRGVR QRHWGKWVAE IRLPKTRTRL WLGTFETAED AALAYDEAAR KIRGENARLN FPNNGEYRQT LSPTVNAKIE SIFNTSDLPM HELKKPAKTE
201: EGFIGFHYTG HKPDQEREIP DIFGYGSGSS PESNITLLNF SSEWIKEDQS FCIGLQKYPS LEIDWEAIDK LSESV
101: TPVKLYRGVR QRHWGKWVAE IRLPKTRTRL WLGTFETAED AALAYDEAAR KIRGENARLN FPNNGEYRQT LSPTVNAKIE SIFNTSDLPM HELKKPAKTE
201: EGFIGFHYTG HKPDQEREIP DIFGYGSGSS PESNITLLNF SSEWIKEDQS FCIGLQKYPS LEIDWEAIDK LSESV
001: MAMALNMNAY VDEFMEALEP FMKVTSSSST SNSSNPKPLT PNFIPNNDQV LPVSNQTGPI GLNQLTPTQI LQIQTELHLR QNQSRRRAGS HLLTAKPTSM
101: KKIDVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAQEAAL AYDQAAHKIR GDNARLNFPD IVRQGHYKQI LSPSINAKIE SICNSSDLPL
201: PQIEKQNKTE EVLSGFSKPE KEPEFGEIYG CGYSGSSPES DITLLDFSSD CVKEDESFLM GLHKYPSLEI DWDAIEKLF
101: KKIDVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAQEAAL AYDQAAHKIR GDNARLNFPD IVRQGHYKQI LSPSINAKIE SICNSSDLPL
201: PQIEKQNKTE EVLSGFSKPE KEPEFGEIYG CGYSGSSPES DITLLDFSSD CVKEDESFLM GLHKYPSLEI DWDAIEKLF
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT5G65130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.