Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010383.1-P | Field mustard | nucleus | 97.83 | 97.83 |
| CDX97423 | Canola | nucleus | 95.65 | 94.62 |
| CDY58717 | Canola | nucleus | 72.83 | 77.01 |
| CDX89202 | Canola | nucleus | 81.16 | 76.45 |
| CDY19002 | Canola | nucleus | 80.8 | 76.11 |
| CDY29884 | Canola | nucleus | 71.74 | 75.86 |
| AT4G28140.1 | Thale cress | nucleus | 76.45 | 72.26 |
| CDY08817 | Canola | mitochondrion | 20.29 | 45.53 |
| CDX81987 | Canola | nucleus | 47.46 | 41.85 |
| CDY69209 | Canola | nucleus | 46.74 | 41.48 |
| Solyc07g054220.1.1 | Tomato | nucleus | 46.01 | 32.56 |
| PGSC0003DMT400047265 | Potato | nucleus | 44.57 | 31.62 |
| KRH55997 | Soybean | nucleus | 42.75 | 29.28 |
| KRH25541 | Soybean | nucleus | 43.12 | 29.24 |
| CDX89442 | Canola | plastid | 23.91 | 28.33 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 47.1 | 27.96 |
| CDY25578 | Canola | plastid | 23.55 | 27.54 |
| KRH26929 | Soybean | nucleus | 42.03 | 27.49 |
| CDX90362 | Canola | nucleus | 25.0 | 26.74 |
| KRH22409 | Soybean | nucleus | 40.58 | 26.73 |
| CDY31606 | Canola | nucleus | 25.0 | 26.54 |
| CDX72672 | Canola | nucleus | 24.64 | 26.46 |
| CDY39455 | Canola | nucleus | 25.0 | 25.65 |
| Os04t0529100-01 | Rice | nucleus | 34.78 | 25.46 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 37.32 | 25.37 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 36.96 | 25.31 |
| Zm00001d025910_P001 | Maize | nucleus | 36.96 | 25.25 |
| CDX69387 | Canola | nucleus | 23.91 | 25.0 |
| CDY14636 | Canola | nucleus, plastid | 22.46 | 24.8 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 40.94 | 24.73 |
| CDY42004 | Canola | nucleus | 23.55 | 24.62 |
| Zm00001d017366_P001 | Maize | nucleus | 39.49 | 24.28 |
| CDY21346 | Canola | nucleus | 22.83 | 24.23 |
| CDY38238 | Canola | nucleus | 22.83 | 24.23 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 39.86 | 24.23 |
| Zm00001d002867_P001 | Maize | nucleus | 39.49 | 24.11 |
| CDX96845 | Canola | nucleus | 15.58 | 23.76 |
| CDX83982 | Canola | nucleus | 15.58 | 23.76 |
| Os02t0638650-01 | Rice | nucleus | 40.58 | 23.68 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 38.77 | 23.57 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 39.13 | 23.43 |
| CDY36551 | Canola | nucleus | 15.58 | 23.37 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 38.41 | 23.35 |
| CDX80507 | Canola | nucleus | 15.94 | 23.28 |
| CDX88176 | Canola | nucleus | 15.94 | 23.28 |
| Zm00001d051239_P001 | Maize | nucleus | 37.32 | 23.15 |
| CDY68539 | Canola | mitochondrion, nucleus | 15.58 | 23.12 |
| CDX87480 | Canola | nucleus | 22.83 | 23.08 |
| OQU85375 | Sorghum | nucleus | 38.77 | 22.86 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 37.68 | 22.86 |
| CDY19805 | Canola | nucleus | 15.22 | 22.83 |
| KXG26694 | Sorghum | nucleus | 38.04 | 22.73 |
| CDY33983 | Canola | nucleus | 22.46 | 22.55 |
| CDY39637 | Canola | nucleus | 15.58 | 22.51 |
| CDX69779 | Canola | nucleus | 15.22 | 22.46 |
| CDY08816 | Canola | nucleus | 22.83 | 22.34 |
| CDX73367 | Canola | nucleus | 25.72 | 22.12 |
| CDY67940 | Canola | nucleus | 15.22 | 22.11 |
| CDY65537 | Canola | mitochondrion | 13.77 | 22.09 |
| CDX87089 | Canola | nucleus | 15.58 | 21.83 |
| CDY48227 | Canola | nucleus | 25.36 | 21.81 |
| CDX88163 | Canola | mitochondrion | 13.77 | 21.71 |
| CDY31284 | Canola | nucleus | 21.74 | 21.58 |
| CDY14542 | Canola | nucleus | 21.74 | 21.28 |
| CDY19812 | Canola | mitochondrion | 13.77 | 21.23 |
| CDY05373 | Canola | mitochondrion | 14.13 | 21.2 |
| CDX68032 | Canola | nucleus | 24.64 | 21.18 |
| CDX87096 | Canola | mitochondrion | 13.77 | 20.99 |
| CDY26847 | Canola | nucleus | 23.55 | 20.9 |
| CDY05479 | Canola | mitochondrion | 13.77 | 20.54 |
| CDX79244 | Canola | nucleus | 24.64 | 20.36 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 40.22 | 20.07 |
| CDX88414 | Canola | nucleus | 23.19 | 19.94 |
| CDY47850 | Canola | nucleus | 21.74 | 19.67 |
| CDY71425 | Canola | nucleus | 19.93 | 18.77 |
| CDY46525 | Canola | nucleus | 19.2 | 18.53 |
| CDY53558 | Canola | nucleus | 22.46 | 17.77 |
| CDY08372 | Canola | nucleus | 6.88 | 8.09 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078FIJ3 | UniProt:A0A078FIJ3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY14255 | ProteinID:CDY14255 | ProteinID:CDY14255.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00078837001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF19 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE181C | SEG:seg | : | : | : | : |
Description
BnaA08g13860DBnaA08g13860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIJ3]
Coordinates
chrLK032041:+:473938..474968
Molecular Weight (calculated)
31596.0 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.847
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDDELNLC TTKGKNIDPS CGEGSSTTSP RSMKKMRNLD HRPKPYFSFS SSNSLGAFPF HLDPTFQNPQ LGYVPVNQQH DQKQMISFSP QQPQHQYMFK
101: YWSDTLNLSP RGRRMMMMNQ ESIVQPYSAT KLYRGVRQRQ WGKWVAEIRK PKSRARLWLG TFDTAEEAAM AYDRQAFKLR GHNATLNFPE HYVNKEAEVH
201: DPSSLDQKQT ETQQLKEVNL EGKEVAVSDG GLEEGMAEAW FNAVTAGWGP ESPLWDDLNS SQFSQSSSSC PMKPFF
101: YWSDTLNLSP RGRRMMMMNQ ESIVQPYSAT KLYRGVRQRQ WGKWVAEIRK PKSRARLWLG TFDTAEEAAM AYDRQAFKLR GHNATLNFPE HYVNKEAEVH
201: DPSSLDQKQT ETQQLKEVNL EGKEVAVSDG GLEEGMAEAW FNAVTAGWGP ESPLWDDLNS SQFSQSSSSC PMKPFF
001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
Arabidopsis Description
ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.