Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G217800.1 | Wheat | nucleus | 96.48 | 95.84 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 96.7 | 95.23 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 94.71 | 77.76 |
| Os02t0638650-01 | Rice | nucleus | 73.79 | 70.82 |
| OQU85375 | Sorghum | nucleus | 67.84 | 65.81 |
| Zm00001d017366_P001 | Maize | nucleus | 64.76 | 65.48 |
| Zm00001d051239_P001 | Maize | nucleus | 61.89 | 63.15 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 50.22 | 50.22 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 38.33 | 42.86 |
| Bra024222.1-P | Field mustard | nucleus | 20.48 | 40.79 |
| CDX97423 | Canola | nucleus | 24.89 | 40.5 |
| Bra010383.1-P | Field mustard | nucleus | 24.23 | 39.86 |
| CDY14255 | Canola | nucleus | 24.23 | 39.86 |
| Bra026280.1-P | Field mustard | nucleus | 25.33 | 39.25 |
| CDY58717 | Canola | nucleus | 22.47 | 39.08 |
| AT4G28140.1 | Thale cress | nucleus | 25.11 | 39.04 |
| CDY19002 | Canola | nucleus | 25.11 | 38.91 |
| CDX89202 | Canola | nucleus | 25.11 | 38.91 |
| CDY29884 | Canola | nucleus | 22.03 | 38.31 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 37.67 | 36.77 |
| PGSC0003DMT400047265 | Potato | nucleus | 31.28 | 36.5 |
| KRH55997 | Soybean | nucleus | 32.38 | 36.48 |
| Solyc07g054220.1.1 | Tomato | nucleus | 31.06 | 36.15 |
| Bra031146.1-P | Field mustard | nucleus | 24.67 | 36.01 |
| CDY69209 | Canola | nucleus | 24.67 | 36.01 |
| CDX81987 | Canola | nucleus | 24.67 | 35.78 |
| KRH25541 | Soybean | nucleus | 31.94 | 35.63 |
| KRH22409 | Soybean | nucleus | 32.6 | 35.32 |
| KRH26929 | Soybean | nucleus | 32.38 | 34.83 |
| AT2G20880.1 | Thale cress | nucleus | 25.55 | 34.52 |
| TraesCS4B01G268100.1 | Wheat | nucleus | 18.5 | 31.82 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 27.31 | 30.77 |
| TraesCS5B01G193200.1 | Wheat | nucleus | 18.72 | 29.93 |
| TraesCS7B01G048100.1 | Wheat | mitochondrion | 10.35 | 29.01 |
| TraesCS6B01G393200.1 | Wheat | mitochondrion | 10.79 | 28.82 |
| TraesCS2B01G530800.1 | Wheat | nucleus | 9.47 | 28.48 |
| TraesCS6B01G331000.1 | Wheat | nucleus | 20.7 | 28.23 |
| TraesCS2B01G531100.1 | Wheat | mitochondrion | 9.47 | 27.74 |
| TraesCS7B01G085900.1 | Wheat | nucleus, plastid | 21.37 | 26.36 |
| TraesCS1B01G441300.1 | Wheat | plastid | 16.3 | 26.24 |
| TraesCS6B01G210300.1 | Wheat | nucleus | 10.35 | 22.71 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 9.91 | 20.0 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF7 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6B01G263800 | EnsemblPlants:TraesCS6B01G263800.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:-:474748717..474750081
Molecular Weight (calculated)
49069.4 Da
IEP (calculated)
7.302
GRAVY (calculated)
-0.586
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAADSGGRR ERRWKGKAAS SAAEKQQQLA PVLEDAPAAA LLPPLKKMRS PDCRLRRSVS SLSSAPASPD SSSVSNPLSP PATSLPPYAS STRQIFPFAY
101: DPSPAAAPRL LQLLRYSSSL YQQPMLPQQL QQQQHTPSQH PQMISFGDAQ QQQQFEAAAA LIPPQYMAPE ALRYWSAALN LSPRGVLGGV VPPALYQHLL
201: RPPGPAKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEDAAMAYDR EAFKLRGENA RLNFPDLFLG KGRSGGSGRT SASAAASASS SSTSAPPTPD
301: ETHAQQAQLL HQREQQQQHT DEQANIGQKP LLSAAEQDVL PEPEQNPELQ NAEQQCSDGS TAMMQQAPVT PGGVWGPADD AWFSAWGPGS SVWDYDMDSA
401: HGLLLQSRFA GDQAGMDYVP TAPEAHVVPA AGTGTACAAP PSPVPPRPPF MWKD
101: DPSPAAAPRL LQLLRYSSSL YQQPMLPQQL QQQQHTPSQH PQMISFGDAQ QQQQFEAAAA LIPPQYMAPE ALRYWSAALN LSPRGVLGGV VPPALYQHLL
201: RPPGPAKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEDAAMAYDR EAFKLRGENA RLNFPDLFLG KGRSGGSGRT SASAAASASS SSTSAPPTPD
301: ETHAQQAQLL HQREQQQQHT DEQANIGQKP LLSAAEQDVL PEPEQNPELQ NAEQQCSDGS TAMMQQAPVT PGGVWGPADD AWFSAWGPGS SVWDYDMDSA
401: HGLLLQSRFA GDQAGMDYVP TAPEAHVVPA AGTGTACAAP PSPVPPRPPF MWKD
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.