Factsheet for Bra031146.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69209	Canola	nucleus	100.0	100.0
AT2G20880.1	Thale cress	nucleus	72.03	66.67
Bra024222.1-P	Field mustard	nucleus	36.66	50.0
Bra010383.1-P	Field mustard	nucleus	41.48	46.74
Bra026280.1-P	Field mustard	nucleus	43.41	46.08
Bra024357.1-P	Field mustard	mitochondrion	15.76	39.84
KRH26929	Soybean	nucleus	42.77	31.52
KRH22409	Soybean	nucleus	41.8	31.03
KRH55997	Soybean	nucleus	39.87	30.77
KRH25541	Soybean	nucleus	39.87	30.47
VIT_12s0059g00280.t01	Wine grape	nucleus	45.02	30.11
PGSC0003DMT400047265	Potato	nucleus	37.62	30.08
Solyc07g054220.1.1	Tomato	nucleus	36.66	29.23
GSMUA_Achr4P26080_001	Banana	nucleus	34.73	26.6
TraesCS2A01G373700.1	Wheat	nucleus	38.59	26.43
Os04t0529100-01	Rice	nucleus	31.83	26.26
Zm00001d051239_P001	Maize	nucleus	37.3	26.07
TraesCS2B01G390800.1	Wheat	nucleus	37.94	25.99
Zm00001d025910_P001	Maize	nucleus	33.76	25.99
TraesCS2D01G369900.1	Wheat	nucleus	37.94	25.93
Zm00001d017366_P001	Maize	nucleus	37.3	25.84
Bra017879.1-P	Field mustard	nucleus	21.54	25.77
Bra031371.1-P	Field mustard	nucleus	21.22	25.38
Bra010657.1-P	Field mustard	nucleus	20.9	25.19
Bra020490.1-P	Field mustard	mitochondrion	14.15	25.14
Zm00001d002867_P001	Maize	nucleus	36.33	25.0
OQU85375	Sorghum	nucleus	37.62	25.0
TraesCS6D01G217800.1	Wheat	nucleus	36.66	24.95
TraesCS6B01G263800.1	Wheat	nucleus	36.01	24.67
Bra011833.1-P	Field mustard	nucleus	21.86	24.64
Bra036536.1-P	Field mustard	mitochondrion	14.15	24.58
Os02t0638650-01	Rice	nucleus	37.3	24.52
TraesCS6A01G235100.1	Wheat	nucleus	35.37	23.86
KXG26694	Sorghum	nucleus	35.37	23.81
Bra009824.1-P	Field mustard	mitochondrion	14.15	22.92
Bra030255.1-P	Field mustard	plastid	17.36	22.88
VIT_19s0014g03180.t01	Wine grape	nucleus	29.58	22.83
Bra031880.1-P	Field mustard	nucleus	20.26	22.74
Bra003659.1-P	Field mustard	nucleus	23.15	22.64
Bra008343.1-P	Field mustard	nucleus	22.51	22.51
Bra024358.1-P	Field mustard	nucleus	20.26	22.34
Bra040381.1-P	Field mustard	nucleus	22.83	22.12
Bra008985.1-P	Field mustard	nucleus	13.18	21.93
Bra036543.1-P	Field mustard	nucleus	12.86	21.86
Bra026140.1-P	Field mustard	nucleus	13.83	21.72
Bra015634.1-P	Field mustard	nucleus	22.51	21.34
Bra016663.1-P	Field mustard	nucleus	13.5	21.0
HORVU6Hr1G060140.1	Barley	nucleus, plastid	36.66	20.61
Bra027736.1-P	Field mustard	nucleus	18.33	18.69
Bra032724.1-P	Field mustard	nucleus	20.9	18.57
Bra027697.1-P	Field mustard	nucleus	17.68	17.8
Bra026770.1-P	Field mustard	nucleus	8.68	15.79
Bra009837.1-P	Field mustard	mitochondrion, nucleus	8.36	15.29

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra031146	EnsemblPlants:Bra031146.1
EnsemblPlants:Bra031146.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893
GO:GO:1900036	GO:GO:2000070	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EQS3	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF19	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00025428F6	SEG:seg	:	:	:	:

Description

AT2G20880 (E=6e-072) | AP2 domain-containing transcription factor, putative

Coordinates

chrA09:-:32305127..32306062

Molecular Weight (calculated)

35811.0 Da

IEP (calculated)

7.432

GRAVY (calculated)

-0.855

Length

311 amino acids

Sequence
(BLAST)

001: MATAKNKGKS IMSFCTSEVE KMDHEMESEE ALQFKSKDNS VSGTDMWKPF VGETSSTLSQ RSLRKIRTID RHNHPYLLSS SYVTPDQPPP PTTAFPFSLA
101: PSNIQNQQLF SYPRQMISFG PQHQVHPFLN AHQQHMMQYW RDILNLPLPL QLARPVIQPF SATKLYRGVR QRHWGKWVAE IRKPRNRTRL WLGTFDTAKE
201: AAMAYDREAF KLRGETARLN FPELFLNKQE STPLHQKQPE TPAAAEANER GNDDSSVAVG GVSDDTGWAE AWFNAIPEEW GQGSPLWDDY HFPISYNQKE
301: DHEQDQPPRQ K

Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)

001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI

Arabidopsis Description

ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.