Factsheet for Solyc07g054220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047265	Potato	nucleus	90.77	91.0
Solyc06g053240.2.1	Tomato	nucleus	4.1	51.61
Bra024222.1-P	Field mustard	nucleus	28.46	48.68
AT4G28140.1	Thale cress	nucleus	36.41	48.63
CDY58717	Canola	nucleus	31.54	47.13
Bra010383.1-P	Field mustard	nucleus	33.08	46.74
CDX97423	Canola	nucleus	33.33	46.59
VIT_12s0059g00280.t01	Wine grape	nucleus	55.38	46.45
CDY29884	Canola	nucleus	31.03	46.36
Bra026280.1-P	Field mustard	nucleus	34.62	46.08
CDY14255	Canola	nucleus	32.56	46.01
CDX89202	Canola	nucleus	34.36	45.73
CDY19002	Canola	nucleus	34.36	45.73
KRH55997	Soybean	nucleus	46.41	44.91
KRH25541	Soybean	nucleus	45.9	43.98
KRH22409	Soybean	nucleus	45.64	42.48
KRH26929	Soybean	nucleus	45.64	42.18
AT2G20880.1	Thale cress	nucleus	32.82	38.1
CDX81987	Canola	nucleus	30.0	37.38
GSMUA_Achr4P26080_001	Banana	nucleus	38.72	37.19
CDY69209	Canola	nucleus	29.23	36.66
Bra031146.1-P	Field mustard	nucleus	29.23	36.66
Zm00001d025910_P001	Maize	nucleus	33.85	32.67
Zm00001d017366_P001	Maize	nucleus	37.44	32.52
Os04t0529100-01	Rice	nucleus	31.28	32.36
Zm00001d051239_P001	Maize	nucleus	36.41	31.91
Zm00001d002867_P001	Maize	nucleus	36.15	31.19
Os02t0638650-01	Rice	nucleus	37.69	31.08
TraesCS6B01G263800.1	Wheat	nucleus	36.15	31.06
OQU85375	Sorghum	nucleus	37.18	30.98
TraesCS6D01G217800.1	Wheat	nucleus	36.15	30.85
TraesCS2D01G369900.1	Wheat	nucleus	35.9	30.77
TraesCS2A01G373700.1	Wheat	nucleus	35.64	30.62
VIT_19s0014g03180.t01	Wine grape	nucleus	31.28	30.27
TraesCS2B01G390800.1	Wheat	nucleus	35.13	30.18
TraesCS6A01G235100.1	Wheat	nucleus	35.38	29.93
KXG26694	Sorghum	nucleus	35.38	29.87
Solyc04g072900.1.1	Tomato	nucleus	18.72	27.65
Solyc12g013660.1.1	Tomato	nucleus	23.33	25.78
Solyc12g056980.1.1	Tomato	nucleus	20.0	25.41
Solyc03g117130.2.1	Tomato	mitochondrion, nucleus	10.51	25.31
Solyc04g054910.2.1	Tomato	nucleus	17.95	25.18
HORVU6Hr1G060140.1	Barley	nucleus, plastid	35.13	24.77
Solyc06g068360.2.1	Tomato	mitochondrion, nucleus	11.03	23.76
Solyc03g116610.2.1	Tomato	nucleus	12.05	23.27
Solyc08g082210.2.1	Tomato	nucleus	15.38	22.73
Solyc06g065820.2.1	Tomato	mitochondrion	11.54	22.06
Solyc12g009490.1.1	Tomato	nucleus	11.79	20.72
Solyc09g091950.1.1	Tomato	extracellular, nucleus	18.46	17.18

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K4CFW7
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF19	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:Solyc07g054220.1	EnsemblPlants:Solyc07g054220.1.1	UniParc:UPI000276C3FD	SEG:seg	:

Description

No Description!

Coordinates

chr7:-:62574142..62575314

Molecular Weight (calculated)

44440.3 Da

IEP (calculated)

5.394

GRAVY (calculated)

-1.016

Length

390 amino acids

Sequence
(BLAST)

001: MATPPEEPME FDDNTFERQQ RRPVFEEASM SNRRFKKIKS PERQSSVQQP FDHRNNPTPM AFPPPPSSSR LVFPFAFDGT QQSMESSSPL GANAMPLFHP
101: QQQNQQQMIS FSPQQCLYPP YFAGELGPSQ NQQQMLRYWN ETLNLSPRGR MMMMSRLGQD NRGYFRPQQV QVQPISATKL YRGVRQRHWG KWVAEIRLPR
201: NRTRLWLGTF DTAEDAAMAY DREAYKLRGD NAKLNFPEHF IGKDRGETST EANSSSITTH ESSLPEHNSE SLQLQTVNNE QLPPSPPPQP PPEGDNHDED
301: SGIGSSQVTT NSQSSELVWG DMAEAWFNAT GWGPGSPVWD DLDTNNNLMF SPNLHFGNFS QQEPHDSDPH QHHDTNSDPS SPSCPMRPFF

Best Arabidopsis Sequence Match ( AT4G28140.1 )
(BLAST)

001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF

Arabidopsis Description

ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.