Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29884 | Canola | nucleus | 69.52 | 77.78 |
| CDX97423 | Canola | nucleus | 74.32 | 77.78 |
| Bra010383.1-P | Field mustard | nucleus | 73.29 | 77.54 |
| CDY58717 | Canola | nucleus | 69.18 | 77.39 |
| CDY14255 | Canola | nucleus | 72.26 | 76.45 |
| Bra024222.1-P | Field mustard | nucleus | 59.59 | 76.32 |
| CDY19002 | Canola | nucleus | 75.34 | 75.09 |
| Bra026280.1-P | Field mustard | nucleus | 74.66 | 74.4 |
| CDX89202 | Canola | nucleus | 74.32 | 74.06 |
| AT2G20880.1 | Thale cress | nucleus | 52.74 | 45.83 |
| Solyc07g054220.1.1 | Tomato | nucleus | 48.63 | 36.41 |
| PGSC0003DMT400047265 | Potato | nucleus | 47.95 | 35.99 |
| KRH26929 | Soybean | nucleus | 44.86 | 31.04 |
| KRH55997 | Soybean | nucleus | 42.47 | 30.77 |
| KRH22409 | Soybean | nucleus | 43.84 | 30.55 |
| KRH25541 | Soybean | nucleus | 42.47 | 30.47 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 48.29 | 30.32 |
| Zm00001d025910_P001 | Maize | nucleus | 37.67 | 27.23 |
| Zm00001d017366_P001 | Maize | nucleus | 41.1 | 26.73 |
| Os04t0529100-01 | Rice | nucleus | 34.25 | 26.53 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 36.64 | 26.35 |
| Zm00001d002867_P001 | Maize | nucleus | 40.41 | 26.11 |
| OQU85375 | Sorghum | nucleus | 41.1 | 25.64 |
| Zm00001d051239_P001 | Maize | nucleus | 39.04 | 25.62 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 40.07 | 25.6 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 35.27 | 25.56 |
| Os02t0638650-01 | Rice | nucleus | 41.1 | 25.37 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 39.38 | 25.33 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 39.04 | 25.11 |
| KXG26694 | Sorghum | nucleus | 39.73 | 25.11 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 38.7 | 24.89 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 38.7 | 24.84 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 38.36 | 24.3 |
| AT1G22190.1 | Thale cress | nucleus | 21.58 | 24.14 |
| AT4G39780.1 | Thale cress | nucleus | 22.26 | 23.9 |
| AT2G22200.1 | Thale cress | plastid | 20.89 | 23.37 |
| AT1G36060.1 | Thale cress | nucleus | 25.0 | 23.25 |
| AT5G25390.2 | Thale cress | nucleus | 14.38 | 22.22 |
| AT5G11190.1 | Thale cress | mitochondrion, nucleus | 13.7 | 21.16 |
| AT1G15360.1 | Thale cress | nucleus | 14.38 | 21.11 |
| AT5G25190.1 | Thale cress | mitochondrion | 13.01 | 20.99 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 39.73 | 20.98 |
| AT5G65130.2 | Thale cress | nucleus | 19.86 | 20.79 |
| AT1G78080.1 | Thale cress | nucleus | 23.29 | 20.36 |
| AT1G64380.1 | Thale cress | nucleus | 20.55 | 17.91 |
| AT4G13620.1 | Thale cress | nucleus | 21.92 | 16.49 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:828929 | ProteinID:AEE85444.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ArrayExpress:AT4G28140 | EnsemblPlantsGene:AT4G28140 | RefSeq:AT4G28140 | TAIR:AT4G28140 | RefSeq:AT4G28140-TAIR-G | EnsemblPlants:AT4G28140.1 |
| TAIR:AT4G28140.1 | EMBL:AY074574 | EMBL:AY097394 | ProteinID:CAB79616.1 | InterPro:DNA-bd_dom_sf | EMBL:DQ011579 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010200 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_194543.1 |
| PFAM:PF00847 | PO:PO:0000026 | PO:PO:0000230 | PO:PO:0000272 | PO:PO:0000293 | PO:PO:0000372 |
| PO:PO:0003015 | PO:PO:0007098 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020124 | PO:PO:0025022 | PO:PO:0025257 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF19 | UniProt:Q9M0J3 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI000009CE00 | SEG:seg | : | : | : | : |
Description
ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
Coordinates
chr4:-:13974493..13975919
Molecular Weight (calculated)
33405.0 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.875
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.