Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003659.1-P | Field mustard | nucleus | 77.54 | 81.45 |
| CDX68032 | Canola | nucleus | 77.54 | 80.69 |
| CDX79244 | Canola | nucleus | 79.34 | 79.34 |
| CDX87480 | Canola | nucleus | 64.67 | 79.12 |
| CDY26847 | Canola | nucleus | 73.65 | 79.1 |
| Bra008343.1-P | Field mustard | nucleus | 73.65 | 79.1 |
| CDX88414 | Canola | nucleus | 74.55 | 77.57 |
| CDY14636 | Canola | nucleus, plastid | 57.78 | 77.2 |
| Bra015634.1-P | Field mustard | nucleus | 75.75 | 77.13 |
| AT1G22190.1 | Thale cress | nucleus | 48.2 | 61.69 |
| Solyc04g072900.1.1 | Tomato | nucleus | 44.01 | 55.68 |
| KRH16699 | Soybean | nucleus | 51.2 | 54.81 |
| KRH18890 | Soybean | nucleus | 49.1 | 52.73 |
| Solyc12g056980.1.1 | Tomato | nucleus | 46.11 | 50.16 |
| AT4G39780.1 | Thale cress | nucleus | 38.62 | 47.43 |
| PGSC0003DMT400022023 | Potato | nucleus | 47.31 | 46.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.32 | 46.55 |
| PGSC0003DMT400024508 | Potato | nucleus | 50.6 | 46.05 |
| GSMUA_Achr10P... | Banana | nucleus | 40.12 | 45.58 |
| AT2G22200.1 | Thale cress | plastid | 35.03 | 44.83 |
| AT5G65130.2 | Thale cress | nucleus | 36.83 | 44.09 |
| AT1G36060.1 | Thale cress | nucleus | 41.32 | 43.95 |
| AT5G25190.1 | Thale cress | mitochondrion | 17.07 | 31.49 |
| AT1G15360.1 | Thale cress | nucleus | 18.56 | 31.16 |
| AT5G11190.1 | Thale cress | mitochondrion, nucleus | 16.17 | 28.57 |
| AT5G25390.2 | Thale cress | nucleus | 15.87 | 28.04 |
| AT1G64380.1 | Thale cress | nucleus | 26.05 | 25.97 |
| AT4G28140.1 | Thale cress | nucleus | 20.36 | 23.29 |
| AT2G20880.1 | Thale cress | nucleus | 23.05 | 22.92 |
| AT4G13620.1 | Thale cress | nucleus | 25.15 | 21.65 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:844143 | ProteinID:AAF17691.1 | ProteinID:AAG52091.1 | ProteinID:AEE36065.1 |
| EMBL:AF003097 | EMBL:AF370152 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G78080 | EnsemblPlantsGene:AT1G78080 |
| RefSeq:AT1G78080 | TAIR:AT1G78080 | RefSeq:AT1G78080-TAIR-G | EnsemblPlants:AT1G78080.1 | TAIR:AT1G78080.1 | EMBL:AY150468 |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009414 | GO:GO:0009416 |
| GO:GO:0009611 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009873 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0045595 | GO:GO:0071472 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_177931.1 | PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 | UniProt:Q8H1E4 | Symbol:RAP2.4 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00000ADA95 | SEG:seg | : | : | : | : |
Description
RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
Coordinates
chr1:+:29364072..29366207
Molecular Weight (calculated)
36611.7 Da
IEP (calculated)
7.070
GRAVY (calculated)
-0.551
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.