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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87096 Canola mitochondrion 84.53 84.53
Bra036536.1-P Field mustard mitochondrion 83.43 84.36
CDY19812 Canola mitochondrion 83.43 84.36
CDX88163 Canola mitochondrion 81.22 84.0
Bra020490.1-P Field mustard mitochondrion 81.22 84.0
CDY65537 Canola mitochondrion 77.35 81.4
CDY05479 Canola mitochondrion 82.87 81.08
CDY05373 Canola mitochondrion 80.66 79.35
Bra009824.1-P Field mustard mitochondrion 83.98 79.17
VIT_04s0008g06000.t01 Wine grape mitochondrion 67.4 65.24
GSMUA_Achr7P19320_001 Banana nucleus 54.7 64.71
KRH09667 Soybean mitochondrion, nucleus 61.88 62.92
KRH44522 Soybean mitochondrion 66.3 61.54
KRH47384 Soybean mitochondrion, nucleus 65.75 61.34
PGSC0003DMT400067218 Potato mitochondrion 64.09 59.18
OQU85888 Sorghum mitochondrion 49.72 58.06
Zm00001d052026_P001 Maize mitochondrion 49.17 57.79
GSMUA_Achr5P22840_001 Banana mitochondrion, nucleus 51.38 57.76
Solyc06g065820.2.1 Tomato mitochondrion 64.64 57.35
TraesCS6A01G360300.1 Wheat mitochondrion 50.28 54.82
TraesCS7B01G048100.1 Wheat mitochondrion 48.07 53.7
TraesCS6D01G343800.1 Wheat mitochondrion 50.28 53.53
TraesCS6B01G393200.1 Wheat mitochondrion 50.28 53.53
Os02t0797100-00 Rice mitochondrion 50.83 53.49
TraesCS7D01G147200.1 Wheat mitochondrion, nucleus 48.07 53.37
TraesCS7D01G147100.1 Wheat mitochondrion, nucleus 48.07 53.05
TraesCS7A01G145800.1 Wheat mitochondrion, nucleus 48.07 52.41
GSMUA_Achr10P... Banana mitochondrion 50.83 52.27
KRH23632 Soybean nucleus 63.54 50.88
Zm00001d045120_P001 Maize mitochondrion 46.96 50.3
Os06t0181700-01 Rice mitochondrion 49.17 50.0
Zm00001d035835_P001 Maize mitochondrion 47.51 49.71
EER87969 Sorghum mitochondrion 48.07 48.07
GSMUA_Achr7P16060_001 Banana mitochondrion 53.59 41.1
AT1G15360.1 Thale cress nucleus 40.88 37.19
AT5G25390.2 Thale cress nucleus 38.12 36.51
AT5G11190.1 Thale cress mitochondrion, nucleus 37.02 35.45
AT1G22190.1 Thale cress nucleus 30.94 21.46
HORVU7Hr1G029870.1 Barley mitochondrion 25.97 19.83
AT4G39780.1 Thale cress nucleus 29.28 19.49
AT2G22200.1 Thale cress plastid 26.52 18.39
AT5G65130.2 Thale cress nucleus 28.18 18.28
AT1G78080.1 Thale cress nucleus 31.49 17.07
AT1G36060.1 Thale cress nucleus 28.18 16.24
AT1G64380.1 Thale cress nucleus 26.52 14.33
AT4G28140.1 Thale cress nucleus 20.99 13.01
AT2G20880.1 Thale cress nucleus 23.2 12.5
AT4G13620.1 Thale cress nucleus 25.41 11.86
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10EntrezGene:832590UniProt:A0A178UBV4EMBL:AC006259ProteinID:AED93410.1
InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfArrayExpress:AT5G25190EnsemblPlantsGene:AT5G25190RefSeq:AT5G25190
TAIR:AT5G25190RefSeq:AT5G25190-TAIR-GEnsemblPlants:AT5G25190.1TAIR:AT5G25190.1EMBL:AY045659EMBL:AY059664
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009719GO:GO:0009873GO:GO:0009987InterPro:IPR001471InterPro:IPR036955RefSeq:NP_197901.1
ProteinID:OAO90694.1PFAM:PF00847PIRSF:PIRSF038123PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PRINTS:PR00367
PFscan:PS51032PANTHER:PTHR31194PANTHER:PTHR31194:SF4UniProt:Q94AW5SMART:SM00380SUPFAM:SSF54171
UniParc:UPI00000AA47ESEG:seg::::
Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
Coordinates
chr5:-:8706745..8707885
Molecular Weight (calculated)
20607.3 Da
IEP (calculated)
7.602
GRAVY (calculated)
-0.712
Length
181 amino acids
Sequence
(BLAST)
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.