CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	25.81	90.91
Zm00001d052026_P001	Maize	mitochondrion	88.39	88.96
Os02t0797100-00	Rice	mitochondrion	84.52	76.16
EER87969	Sorghum	mitochondrion	75.48	64.64
GSMUA_Achr7P19320_001	Banana	nucleus	62.58	63.4
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	60.65	58.39
CDY65537	Canola	mitochondrion	58.71	52.91
GSMUA_Achr10P...	Banana	mitochondrion	59.35	52.27
Bra020490.1-P	Field mustard	mitochondrion	58.06	51.43
CDX88163	Canola	mitochondrion	57.42	50.86
VIT_09s0002g09120.t01	Wine grape	nucleus	56.77	50.29
VIT_04s0008g06000.t01	Wine grape	mitochondrion	60.65	50.27
AT5G25190.1	Thale cress	mitochondrion	58.06	49.72
KRH09667	Soybean	mitochondrion, nucleus	56.77	49.44
CDX87096	Canola	mitochondrion	57.42	49.17
CDY05479	Canola	mitochondrion	58.06	48.65
CDY19812	Canola	mitochondrion	56.13	48.6
Bra036536.1-P	Field mustard	mitochondrion	56.13	48.6
CDY05373	Canola	mitochondrion	57.42	48.37
VIT_09s0002g09140.t01	Wine grape	nucleus	54.84	48.02
KRH61698	Soybean	mitochondrion, nucleus	59.35	47.67
KRH52366	Soybean	mitochondrion, nucleus	59.35	47.42
KRH47384	Soybean	mitochondrion, nucleus	58.06	46.39
Bra009824.1-P	Field mustard	mitochondrion	57.42	46.35
KRH15790	Soybean	nucleus	59.35	46.23
KRH05258	Soybean	nucleus	60.0	46.04
KRH44522	Soybean	mitochondrion	57.42	45.64
PGSC0003DMT400067218	Potato	mitochondrion	56.77	44.9
KRH12836	Soybean	nucleus	36.77	44.88
VIT_07s0031g00420.t01	Wine grape	nucleus	27.1	43.75
Solyc06g065820.2.1	Tomato	mitochondrion	56.77	43.14
GSMUA_Achr7P16060_001	Banana	mitochondrion	65.16	42.8
EES12999	Sorghum	mitochondrion	44.52	40.12
KRH23632	Soybean	nucleus	56.13	38.5
KXG29745	Sorghum	nucleus	42.58	30.99
EER90018	Sorghum	nucleus	41.94	27.66
EES13814	Sorghum	nucleus	33.55	19.19
HORVU7Hr1G029870.1	Barley	mitochondrion	27.74	18.14
KXG35507	Sorghum	nucleus	33.55	17.11
EER92713	Sorghum	nucleus	34.19	16.72
EES19973	Sorghum	plastid	30.32	15.56
EES07235	Sorghum	nucleus	32.9	15.41
EER89448	Sorghum	nucleus	29.68	12.53
OQU85375	Sorghum	nucleus	29.68	9.83
KXG26694	Sorghum	nucleus	29.03	9.74

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8084644	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
UniProt:C5XUH5	InterPro:DNA-bd_dom_sf	ProteinID:EES07688.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:OQU85888	ProteinID:OQU85888	ProteinID:OQU85888.1
PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF19
SMART:SM00380	EnsemblPlantsGene:SORBI_3004G331300	SUPFAM:SSF54171	UniParc:UPI0001A862B1	RefSeq:XP_002454712.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:66453722..66455052

Molecular Weight (calculated)

16947.9 Da

IEP (calculated)

7.511

GRAVY (calculated)

-0.349

Length

155 amino acids

Sequence
(BLAST)

001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKA RIWLGTFETA EDAARAYDEA ARIMCGPRAR TNFPADASDP PAAAASPSFL SAALVEKLHR FNLASVQATQ
101: RQREAAAAAS AAAAAASAAT PPPGAQWGGR FLEEQHVEQM IEELLDSNFS MEICC

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.