CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032295_P001	Maize	nucleus	81.92	84.73
Os08t0408500-01	Rice	nucleus	64.94	62.86
TraesCS7D01G469200.1	Wheat	nucleus	35.79	58.08
KXG35507	Sorghum	nucleus	60.52	53.95
GSMUA_Achr9P12950_001	Banana	nucleus	48.34	38.64
EES07235	Sorghum	nucleus	46.13	37.76
EER92713	Sorghum	nucleus	43.91	37.54
EER89448	Sorghum	nucleus	47.6	35.15
OQU85888	Sorghum	mitochondrion	19.19	33.55
AT1G36060.1	Thale cress	nucleus	38.75	33.44
CDX73367	Canola	nucleus	39.11	33.02
Bra040381.1-P	Field mustard	nucleus	38.75	32.71
CDY48227	Canola	nucleus	38.75	32.71
EES12999	Sorghum	mitochondrion	19.56	30.81
EER87969	Sorghum	mitochondrion	19.56	29.28
KXG29745	Sorghum	nucleus	19.19	24.41
EES19973	Sorghum	plastid	26.57	23.84
EER90018	Sorghum	nucleus	19.19	22.13
KXG26694	Sorghum	nucleus	29.15	17.1
OQU85375	Sorghum	nucleus	29.52	17.09

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EntrezGene:8073540	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5YKT7
InterPro:DNA-bd_dom_sf	EnsemblPlants:EES13814	ProteinID:EES13814	ProteinID:EES13814.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF16	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G124100	SUPFAM:SSF54171
unigene:Sbi.18556	UniParc:UPI0001A877EB	RefSeq:XP_002444319.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:53163083..53164403

Molecular Weight (calculated)

29266.6 Da

IEP (calculated)

5.781

GRAVY (calculated)

-0.414

Length

271 amino acids

Sequence
(BLAST)

001: MAAAINLPGP SEDLMRAMES FMQEDAAPSP LPMPPAAQYP PATPTHLSPA QMQFIQAQLH LQRNPGLGPR AQPMKPAVPI PPAQQRPAQK LYRGVRQRHW
101: GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDQAAYRLRG DAARLNFPDN AASRAPLDPA VDAKLQAICA TIAAASSKGG ARAKQSKAMP INAPVLEATA
201: ACPSNSSSDE GSGSDEEMSS RTTTTPVVVA PPVVADMGQL DFSEAPWDEA ESFVLRKYPS YEIDWDALLS N

Best Arabidopsis Sequence Match ( AT4G39780.1 )
(BLAST)

001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES

Arabidopsis Description

ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.