CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	22.65	93.18
Zm00001d045120_P001	Maize	mitochondrion	80.11	85.8
Zm00001d035835_P001	Maize	mitochondrion	80.66	84.39
OQU85888	Sorghum	mitochondrion	64.64	75.48
Os06t0181700-01	Rice	mitochondrion	72.93	74.16
TraesCS7B01G048100.1	Wheat	mitochondrion	65.75	73.46
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	65.75	73.01
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	66.85	72.89
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	65.75	72.56
GSMUA_Achr7P19320_001	Banana	nucleus	50.83	60.13
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	48.07	54.04
GSMUA_Achr10P...	Banana	mitochondrion	49.72	51.14
VIT_09s0002g09120.t01	Wine grape	nucleus	48.07	49.71
CDY65537	Canola	mitochondrion	46.96	49.42
KRH09667	Soybean	mitochondrion, nucleus	48.07	48.88
VIT_04s0008g06000.t01	Wine grape	mitochondrion	50.28	48.66
VIT_09s0002g09140.t01	Wine grape	nucleus	47.51	48.59
Bra020490.1-P	Field mustard	mitochondrion	46.96	48.57
AT5G25190.1	Thale cress	mitochondrion	48.07	48.07
Bra036536.1-P	Field mustard	mitochondrion	47.51	48.04
CDY19812	Canola	mitochondrion	47.51	48.04
CDX88163	Canola	mitochondrion	46.41	48.0
CDY05479	Canola	mitochondrion	48.07	47.03
CDX87096	Canola	mitochondrion	46.96	46.96
KRH47384	Soybean	mitochondrion, nucleus	49.72	46.39
CDY05373	Canola	mitochondrion	46.96	46.2
KRH61698	Soybean	mitochondrion, nucleus	49.17	46.11
KRH52366	Soybean	mitochondrion, nucleus	49.17	45.88
VIT_07s0031g00420.t01	Wine grape	nucleus	24.31	45.83
KRH44522	Soybean	mitochondrion	49.17	45.64
Bra009824.1-P	Field mustard	mitochondrion	46.96	44.27
KRH05258	Soybean	nucleus	49.17	44.06
PGSC0003DMT400067218	Potato	mitochondrion	47.51	43.88
KRH15790	Soybean	nucleus	48.07	43.72
Solyc06g065820.2.1	Tomato	mitochondrion	48.07	42.65
EES12999	Sorghum	mitochondrion	39.78	41.86
KRH12836	Soybean	nucleus	29.28	41.73
GSMUA_Achr7P16060_001	Banana	mitochondrion	51.93	39.83
KRH23632	Soybean	nucleus	48.07	38.5
KXG29745	Sorghum	nucleus	36.46	30.99
EER90018	Sorghum	nucleus	35.36	27.23
EES13814	Sorghum	nucleus	29.28	19.56
EER92713	Sorghum	nucleus	30.39	17.35
KXG35507	Sorghum	nucleus	28.18	16.78
EES07235	Sorghum	nucleus	29.83	16.31
EES19973	Sorghum	plastid	24.86	14.9
EER89448	Sorghum	nucleus	26.52	13.08
KXG26694	Sorghum	nucleus	26.52	10.39
OQU85375	Sorghum	nucleus	25.41	9.83

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8065407	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
UniProt:C5Z5G9	InterPro:DNA-bd_dom_sf	EnsemblPlants:EER87969	ProteinID:EER87969	ProteinID:EER87969.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF39	SMART:SM00380
EnsemblPlantsGene:SORBI_3010G063900	SUPFAM:SSF54171	UniParc:UPI0001A89188	RefSeq:XP_002436602.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:5053429..5055288

Molecular Weight (calculated)

19369.7 Da

IEP (calculated)

6.797

GRAVY (calculated)

-0.333

Length

181 amino acids

Sequence
(BLAST)

001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCGPRVR TNFPEDAAGA GDGQQQQQAA SSFLSPALVA KLHRFNLASV
101: QAARGKADAA SAAAASAPAV LPRIAAMPAG NAAMGGIAPS PPPPPSSSSA GDWSGGFLEE QYVDQMIEEL LDSNFSMEIS Y

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.