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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009824.1-P Field mustard mitochondrion 99.43 90.62
CDY65537 Canola mitochondrion 86.86 88.37
AT5G25190.1 Thale cress mitochondrion 84.0 81.22
CDY05479 Canola mitochondrion 84.0 79.46
CDY05373 Canola mitochondrion 81.71 77.72
CDY19812 Canola mitochondrion 79.43 77.65
CDX87096 Canola mitochondrion 80.0 77.35
VIT_04s0008g06000.t01 Wine grape mitochondrion 66.86 62.57
KRH09667 Soybean mitochondrion, nucleus 63.43 62.36
GSMUA_Achr7P19320_001 Banana nucleus 54.29 62.09
KRH47384 Soybean mitochondrion, nucleus 65.71 59.28
KRH44522 Soybean mitochondrion 65.71 58.97
OQU85888 Sorghum mitochondrion 50.86 57.42
PGSC0003DMT400067218 Potato mitochondrion 64.0 57.14
Zm00001d052026_P001 Maize mitochondrion 49.71 56.49
Solyc06g065820.2.1 Tomato mitochondrion 64.57 55.39
GSMUA_Achr5P22840_001 Banana mitochondrion, nucleus 50.86 55.28
TraesCS6A01G360300.1 Wheat mitochondrion 50.86 53.61
Os02t0797100-00 Rice mitochondrion 52.57 53.49
TraesCS7D01G147200.1 Wheat mitochondrion, nucleus 49.71 53.37
TraesCS7B01G048100.1 Wheat mitochondrion 49.14 53.09
TraesCS7D01G147100.1 Wheat mitochondrion, nucleus 49.71 53.05
TraesCS7A01G145800.1 Wheat mitochondrion, nucleus 49.71 52.41
TraesCS6B01G393200.1 Wheat mitochondrion 50.86 52.35
TraesCS6D01G343800.1 Wheat mitochondrion 50.86 52.35
GSMUA_Achr10P... Banana mitochondrion 52.57 52.27
Zm00001d045120_P001 Maize mitochondrion 48.57 50.3
Os06t0181700-01 Rice mitochondrion 50.86 50.0
KRH23632 Soybean nucleus 64.0 49.56
Zm00001d035835_P001 Maize mitochondrion 48.0 48.55
EER87969 Sorghum mitochondrion 48.0 46.41
GSMUA_Achr7P16060_001 Banana mitochondrion 56.57 41.95
CDX83982 Canola nucleus 42.29 40.88
CDX96845 Canola nucleus 42.29 40.88
CDY36551 Canola nucleus 42.86 40.76
CDY39637 Canola nucleus 43.43 39.79
CDY67940 Canola nucleus 41.14 37.89
CDY19805 Canola nucleus 38.29 36.41
CDY68539 Canola mitochondrion, nucleus 38.29 36.02
CDX88176 Canola nucleus 38.86 35.98
CDX69779 Canola nucleus 38.29 35.83
CDX80507 Canola nucleus 38.29 35.45
CDX87089 Canola nucleus 38.86 34.52
CDY08817 Canola mitochondrion 21.71 30.89
CDY14636 Canola nucleus, plastid 30.29 21.2
CDX90362 Canola nucleus 30.86 20.93
CDY38238 Canola nucleus 30.86 20.77
CDY21346 Canola nucleus 30.86 20.77
CDX69387 Canola nucleus 30.29 20.08
CDY39455 Canola nucleus 30.86 20.07
CDY31606 Canola nucleus 29.71 20.0
CDX72672 Canola nucleus 29.14 19.84
CDX89442 Canola plastid 26.29 19.74
CDY42004 Canola nucleus 29.71 19.7
CDX87480 Canola nucleus 30.29 19.41
CDY25578 Canola plastid 25.71 19.07
CDY33983 Canola nucleus 29.71 18.91
HORVU7Hr1G029870.1 Barley mitochondrion 25.14 18.57
CDY31284 Canola nucleus 29.14 18.35
CDY14542 Canola nucleus 28.57 17.73
CDY08816 Canola nucleus 28.57 17.73
CDY46525 Canola nucleus 28.57 17.48
CDY71425 Canola nucleus 29.14 17.41
CDY26847 Canola nucleus 30.86 17.36
CDX68032 Canola nucleus 31.43 17.13
CDX88414 Canola nucleus 30.86 16.82
CDY47850 Canola nucleus 29.14 16.72
CDX73367 Canola nucleus 29.71 16.2
CDX79244 Canola nucleus 30.86 16.17
CDY48227 Canola nucleus 29.14 15.89
CDY58717 Canola nucleus 22.29 14.94
CDY29884 Canola nucleus 22.29 14.94
CDX97423 Canola nucleus 22.86 14.34
CDX81987 Canola nucleus 25.14 14.06
CDY53558 Canola nucleus 28.0 14.04
CDY69209 Canola nucleus 24.57 13.83
CDY14255 Canola nucleus 21.71 13.77
CDY19002 Canola nucleus 22.29 13.31
CDX89202 Canola nucleus 22.29 13.31
CDY08372 Canola nucleus 10.29 7.66
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10GO:A0A078DLP7InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
EnsemblPlants:CDX88163ProteinID:CDX88163ProteinID:CDX88163.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00147616001InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PIRSF:PIRSF038123PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31194PANTHER:PTHR31194:SF4
SMART:SM00380SUPFAM:SSF54171UniParc:UPI0004EE8426SEG:seg::
Description
BnaA06g27540D
Coordinates
chrLK031854:-:1044103..1044888
Molecular Weight (calculated)
20144.0 Da
IEP (calculated)
9.222
GRAVY (calculated)
-0.702
Length
175 amino acids
Sequence
(BLAST)
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAV PSSSSKLLSA TLTAKLHKCY MASLHLTKQT
101: QTQSQAQAQN PRLRSLSLPD TDITETMKEI KWEDGNANLQ QSFKPLEEDH IEQMIEELRH YGSIEFCSVL PTRSM
Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.