Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G343800.1 | Wheat | mitochondrion | 96.47 | 96.47 |
| TraesCS6A01G360300.1 | Wheat | mitochondrion | 94.12 | 96.39 |
| VIT_04s0043g00510.t01 | Wine grape | mitochondrion, nucleus | 24.12 | 93.18 |
| TraesCS7B01G048100.1 | Wheat | mitochondrion | 66.47 | 69.75 |
| GSMUA_Achr7P19320_001 | Banana | nucleus | 57.06 | 63.4 |
| GSMUA_Achr5P22840_001 | Banana | mitochondrion, nucleus | 54.71 | 57.76 |
| GSMUA_Achr10P... | Banana | mitochondrion | 55.29 | 53.41 |
| CDY65537 | Canola | mitochondrion | 53.53 | 52.91 |
| VIT_09s0002g09120.t01 | Wine grape | nucleus | 53.53 | 52.0 |
| Bra020490.1-P | Field mustard | mitochondrion | 52.94 | 51.43 |
| CDX88163 | Canola | mitochondrion | 52.35 | 50.86 |
| KRH09667 | Soybean | mitochondrion, nucleus | 52.94 | 50.56 |
| TraesCS2B01G531100.1 | Wheat | mitochondrion | 45.88 | 50.32 |
| VIT_09s0002g09140.t01 | Wine grape | nucleus | 52.35 | 50.28 |
| CDX87096 | Canola | mitochondrion | 53.53 | 50.28 |
| AT5G25190.1 | Thale cress | mitochondrion | 53.53 | 50.28 |
| VIT_04s0008g06000.t01 | Wine grape | mitochondrion | 55.29 | 50.27 |
| CDY19812 | Canola | mitochondrion | 52.35 | 49.72 |
| Bra036536.1-P | Field mustard | mitochondrion | 52.35 | 49.72 |
| TraesCS2B01G530800.1 | Wheat | nucleus | 43.53 | 49.01 |
| KRH61698 | Soybean | mitochondrion, nucleus | 55.29 | 48.7 |
| CDY05479 | Canola | mitochondrion | 52.94 | 48.65 |
| KRH05258 | Soybean | nucleus | 57.65 | 48.51 |
| KRH52366 | Soybean | mitochondrion, nucleus | 55.29 | 48.45 |
| CDY05373 | Canola | mitochondrion | 52.35 | 48.37 |
| KRH47384 | Soybean | mitochondrion, nucleus | 54.71 | 47.94 |
| KRH44522 | Soybean | mitochondrion | 54.71 | 47.69 |
| KRH15790 | Soybean | nucleus | 55.29 | 47.24 |
| Bra009824.1-P | Field mustard | mitochondrion | 52.94 | 46.88 |
| KRH12836 | Soybean | nucleus | 34.71 | 46.46 |
| PGSC0003DMT400067218 | Potato | mitochondrion | 52.35 | 45.41 |
| VIT_07s0031g00420.t01 | Wine grape | nucleus | 24.71 | 43.75 |
| Solyc06g065820.2.1 | Tomato | mitochondrion | 52.35 | 43.63 |
| GSMUA_Achr7P16060_001 | Banana | mitochondrion | 57.06 | 41.1 |
| KRH23632 | Soybean | nucleus | 52.35 | 39.38 |
| TraesCS6B01G210300.1 | Wheat | nucleus | 40.59 | 33.33 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 39.41 | 29.78 |
| TraesCS4B01G268100.1 | Wheat | nucleus | 30.0 | 19.32 |
| TraesCS5B01G193200.1 | Wheat | nucleus | 31.18 | 18.66 |
| TraesCS1B01G441300.1 | Wheat | plastid | 28.24 | 17.02 |
| TraesCS6B01G331000.1 | Wheat | nucleus | 31.76 | 16.22 |
| TraesCS7B01G085900.1 | Wheat | nucleus, plastid | 29.41 | 13.59 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 29.41 | 11.01 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 28.82 | 10.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF19 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6B01G393200 | EnsemblPlants:TraesCS6B01G393200.1 |
| TIGR:cd00018 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:668029402..668030019
Molecular Weight (calculated)
18104.4 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.099
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCGQRAR TNFPAAAAAT GSVSSSSAAV ASSFLSAALV AKLHRFNMAS
101: VQAAQRQREA AAAAASAAAA TAAAMPPGGA HAVSPLPSST GWVGTLLEEQ HVEQMIAELL DSDFSMEICH
101: VQAAQRQREA AAAAASAAAA TAAAMPPGGA HAVSPLPSST GWVGTLLEEQ HVEQMIAELL DSDFSMEICH
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.