CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036536.1-P	Field mustard	mitochondrion	96.69	97.77
CDY19812	Canola	mitochondrion	96.69	97.77
AT5G25190.1	Thale cress	mitochondrion	84.53	84.53
CDY65537	Canola	mitochondrion	79.56	83.72
CDY05479	Canola	mitochondrion	82.32	80.54
CDX88163	Canola	mitochondrion	77.35	80.0
CDY05373	Canola	mitochondrion	80.66	79.35
GSMUA_Achr7P19320_001	Banana	nucleus	54.14	64.05
VIT_04s0008g06000.t01	Wine grape	mitochondrion	65.19	63.1
KRH09667	Soybean	mitochondrion, nucleus	61.33	62.36
KRH44522	Soybean	mitochondrion	64.09	59.49
KRH47384	Soybean	mitochondrion, nucleus	63.54	59.28
OQU85888	Sorghum	mitochondrion	49.17	57.42
Zm00001d052026_P001	Maize	mitochondrion	48.62	57.14
PGSC0003DMT400067218	Potato	mitochondrion	61.33	56.63
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	50.28	56.52
Solyc06g065820.2.1	Tomato	mitochondrion	61.88	54.9
TraesCS6A01G360300.1	Wheat	mitochondrion	50.28	54.82
TraesCS6D01G343800.1	Wheat	mitochondrion	50.28	53.53
TraesCS6B01G393200.1	Wheat	mitochondrion	50.28	53.53
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	48.07	53.37
TraesCS7B01G048100.1	Wheat	mitochondrion	47.51	53.09
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	48.07	53.05
Os02t0797100-00	Rice	mitochondrion	50.28	52.91
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	48.07	52.41
GSMUA_Achr10P...	Banana	mitochondrion	49.17	50.57
KRH23632	Soybean	nucleus	62.43	50.0
Zm00001d045120_P001	Maize	mitochondrion	46.41	49.7
Os06t0181700-01	Rice	mitochondrion	48.62	49.44
Zm00001d035835_P001	Maize	mitochondrion	46.41	48.55
EER87969	Sorghum	mitochondrion	46.96	46.96
CDX83982	Canola	nucleus	41.99	41.99
CDX96845	Canola	nucleus	41.99	41.99
GSMUA_Achr7P16060_001	Banana	mitochondrion	54.7	41.95
CDY36551	Canola	nucleus	42.54	41.85
CDY39637	Canola	nucleus	43.09	40.84
CDY67940	Canola	nucleus	40.88	38.95
CDY68539	Canola	mitochondrion, nucleus	38.12	37.1
CDY19805	Canola	nucleus	37.57	36.96
CDX69779	Canola	nucleus	38.12	36.9
CDX88176	Canola	nucleus	38.12	36.51
CDX80507	Canola	nucleus	37.57	35.98
CDX87089	Canola	nucleus	38.12	35.03
CDY08817	Canola	mitochondrion	20.99	30.89
CDY14636	Canola	nucleus, plastid	29.28	21.2
CDX90362	Canola	nucleus	29.83	20.93
CDY38238	Canola	nucleus	29.83	20.77
CDY21346	Canola	nucleus	29.83	20.77
HORVU7Hr1G029870.1	Barley	mitochondrion	27.07	20.68
CDY31606	Canola	nucleus	29.28	20.38
CDX69387	Canola	nucleus	29.28	20.08
CDY39455	Canola	nucleus	29.83	20.07
CDX72672	Canola	nucleus	28.18	19.84
CDX89442	Canola	plastid	25.41	19.74
CDY42004	Canola	nucleus	28.73	19.7
CDX87480	Canola	nucleus	29.28	19.41
CDY33983	Canola	nucleus	29.28	19.27
CDY25578	Canola	plastid	24.86	19.07
CDY31284	Canola	nucleus	29.28	19.06
CDY14542	Canola	nucleus	28.73	18.44
CDY08816	Canola	nucleus	28.18	18.09
CDY46525	Canola	nucleus	28.18	17.83
CDY71425	Canola	nucleus	28.18	17.41
CDY26847	Canola	nucleus	29.83	17.36
CDX68032	Canola	nucleus	30.39	17.13
CDX88414	Canola	nucleus	29.83	16.82
CDX79244	Canola	nucleus	30.39	16.47
CDY47850	Canola	nucleus	27.62	16.39
CDX73367	Canola	nucleus	28.73	16.2
CDY48227	Canola	nucleus	28.18	15.89
CDY58717	Canola	nucleus	22.1	15.33
CDY29884	Canola	nucleus	21.55	14.94
CDX81987	Canola	nucleus	24.86	14.38
CDX97423	Canola	nucleus	22.1	14.34
CDY69209	Canola	nucleus	24.31	14.15
CDY14255	Canola	nucleus	20.99	13.77
CDY19002	Canola	nucleus	21.55	13.31
CDX89202	Canola	nucleus	21.55	13.31
CDY53558	Canola	nucleus	25.41	13.18
CDY08372	Canola	nucleus	8.84	6.81

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	GO:A0A078DCU4	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EnsemblPlants:CDX87096	ProteinID:CDX87096	ProteinID:CDX87096.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00145996001	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF4
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004EB2AC4	SEG:seg	:	:

Description

BnaC09g04110D

Coordinates

chrLK031849:+:448598..449422

Molecular Weight (calculated)

20761.5 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.757

Length

181 amino acids

Sequence
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGNRAR TNFPYNPNAI PSSSSKLLSA TLTAKLHKCY MASLQLTKQT
101: QTQTQAQTQM QNARYDGVMN VTSDGNHYNR GGVTEIKWED GDVDMQHNLR PLEEDHIEQM IEELLHYGSI ELRSVSPTQS L

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.