Factsheet for GSMUA_Achr10P24170_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	21.59	86.36
GSMUA_Achr7P19320_001	Banana	nucleus	60.23	69.28
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	59.66	65.22
Zm00001d052026_P001	Maize	mitochondrion	52.27	59.74
OQU85888	Sorghum	mitochondrion	52.27	59.35
VIT_09s0002g09120.t01	Wine grape	nucleus	56.25	56.57
TraesCS6A01G360300.1	Wheat	mitochondrion	52.84	56.02
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	52.27	55.42
TraesCS6B01G393200.1	Wheat	mitochondrion	53.41	55.29
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	51.14	55.21
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	51.14	54.88
TraesCS6D01G343800.1	Wheat	mitochondrion	52.84	54.71
TraesCS7B01G048100.1	Wheat	mitochondrion	50.0	54.32
Os02t0797100-00	Rice	mitochondrion	52.84	54.07
Zm00001d045120_P001	Maize	mitochondrion	51.7	53.85
VIT_04s0008g06000.t01	Wine grape	mitochondrion	56.82	53.48
VIT_09s0002g09140.t01	Wine grape	nucleus	53.41	53.11
CDY65537	Canola	mitochondrion	51.7	52.91
KRH12836	Soybean	nucleus	38.07	52.76
CDX88163	Canola	mitochondrion	52.27	52.57
Bra020490.1-P	Field mustard	mitochondrion	52.27	52.57
Zm00001d035835_P001	Maize	mitochondrion	51.14	52.02
Os06t0181700-01	Rice	mitochondrion	52.27	51.69
AT5G25190.1	Thale cress	mitochondrion	52.27	50.83
CDY19812	Canola	mitochondrion	51.14	50.28
Bra036536.1-P	Field mustard	mitochondrion	51.14	50.28
CDY05373	Canola	mitochondrion	52.27	50.0
KRH09667	Soybean	mitochondrion, nucleus	50.57	50.0
KRH61698	Soybean	mitochondrion, nucleus	54.55	49.74
CDY05479	Canola	mitochondrion	52.27	49.73
EER87969	Sorghum	mitochondrion	51.14	49.72
KRH52366	Soybean	mitochondrion, nucleus	54.55	49.48
KRH15790	Soybean	nucleus	55.68	49.25
CDX87096	Canola	mitochondrion	50.57	49.17
KRH05258	Soybean	nucleus	56.25	49.01
KRH47384	Soybean	mitochondrion, nucleus	53.98	48.97
GSMUA_Achr9P13760_001	Banana	mitochondrion	42.05	48.68
GSMUA_Achr7P16060_001	Banana	mitochondrion	64.77	48.31
KRH44522	Soybean	mitochondrion	53.41	48.21
Bra009824.1-P	Field mustard	mitochondrion	51.7	47.4
PGSC0003DMT400067218	Potato	mitochondrion	51.7	46.43
Solyc06g065820.2.1	Tomato	mitochondrion	52.27	45.1
VIT_07s0031g00420.t01	Wine grape	nucleus	23.86	43.75
KRH23632	Soybean	nucleus	50.57	39.38
GSMUA_Achr6P05210_001	Banana	nucleus	39.2	37.91
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	38.64	34.17
GSMUA_Achr7P10160_001	Banana	nucleus	39.77	33.98
GSMUA_Achr4P02200_001	Banana	mitochondrion	43.75	33.05
GSMUA_Achr1P27990_001	Banana	nucleus	26.7	18.95
GSMUA_Achr6P10440_001	Banana	nucleus	27.84	18.77
GSMUA_Achr5P09470_001	Banana	nucleus	26.14	18.4
GSMUA_AchrUn_...	Banana	nucleus	28.41	18.18
GSMUA_Achr10P...	Banana	nucleus	27.27	17.2
GSMUA_Achr3P04360_001	Banana	nucleus	24.43	17.2
HORVU7Hr1G029870.1	Barley	mitochondrion	22.73	16.88
GSMUA_Achr10P...	Banana	nucleus	27.84	16.67
GSMUA_Achr8P28500_001	Banana	nucleus	25.57	16.19
GSMUA_Achr9P12950_001	Banana	nucleus	28.98	15.04
GSMUA_Achr10P...	Banana	nucleus	28.41	14.53
GSMUA_Achr3P01650_001	Banana	nucleus	26.7	14.24
GSMUA_Achr4P26080_001	Banana	nucleus	27.84	12.07
GSMUA_Achr8P14110_001	Banana	nucleus	21.59	9.55

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G24170_001	EnsemblPlants:GSMUA_Achr10P24170_001
EnsemblPlants:GSMUA_Achr10T24170_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0RKZ2	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000296909D	SEG:seg	:	:	:	:

Description

Ethylene-responsive transcription factor ERF003 [Source:GMGC_GENE;Acc:GSMUA_Achr10G24170_001]

Coordinates

chr10:-:28606920..28607544

Molecular Weight (calculated)

19833.5 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.424

Length

176 amino acids

Sequence
(BLAST)

001: MVRPQPRYRG VRQRQWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLVAGPRAR TNFPFNPNSA SSSSETNYLS AALTAKLHRC NLASLEAAPQ
101: PVVRNSPALK VSVSVVDRPK NKMTVAVEQP VYPNWIMKES GTDEVEFSYL EEHQVEQMIE ELLDSNLGVE LCYASL

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.