Factsheet for GSMUA_Achr4P26080_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0529100-01	Rice	nucleus	37.44	40.32
GSMUA_Achr8P14110_001	Banana	nucleus	39.16	39.95
Zm00001d025910_P001	Maize	nucleus	39.66	39.85
Zm00001d051239_P001	Maize	nucleus	43.6	39.78
OQU85375	Sorghum	nucleus	45.81	39.74
PGSC0003DMT400047265	Potato	nucleus	37.68	39.33
Os02t0638650-01	Rice	nucleus	45.57	39.11
Zm00001d017366_P001	Maize	nucleus	42.86	38.75
Solyc07g054220.1.1	Tomato	nucleus	37.19	38.72
Bra026280.1-P	Field mustard	nucleus	27.83	38.57
TraesCS6D01G217800.1	Wheat	nucleus	43.35	38.51
TraesCS6B01G263800.1	Wheat	nucleus	42.86	38.33
TraesCS2B01G390800.1	Wheat	nucleus	42.86	38.33
CDX89202	Canola	nucleus	27.59	38.23
Bra024222.1-P	Field mustard	nucleus	21.43	38.16
TraesCS2A01G373700.1	Wheat	nucleus	42.61	38.11
Bra010383.1-P	Field mustard	nucleus	25.86	38.04
CDX97423	Canola	nucleus	26.11	37.99
KRH26929	Soybean	nucleus	39.41	37.91
Zm00001d002867_P001	Maize	nucleus	41.87	37.61
TraesCS2D01G369900.1	Wheat	nucleus	42.12	37.58
CDY19002	Canola	nucleus	27.09	37.54
TraesCS6A01G235100.1	Wheat	nucleus	42.61	37.53
CDY14255	Canola	nucleus	25.37	37.32
KRH22409	Soybean	nucleus	38.42	37.23
VIT_12s0059g00280.t01	Wine grape	nucleus	42.61	37.2
KXG26694	Sorghum	nucleus	42.12	37.01
AT4G28140.1	Thale cress	nucleus	26.35	36.64
CDY58717	Canola	nucleus	22.91	35.63
CDX81987	Canola	nucleus	27.34	35.46
CDY29884	Canola	nucleus	22.66	35.25
AT2G20880.1	Thale cress	nucleus	29.06	35.12
GSMUA_Achr3P04360_001	Banana	nucleus	21.43	34.8
KRH55997	Soybean	nucleus	34.48	34.74
Bra031146.1-P	Field mustard	nucleus	26.6	34.73
CDY69209	Canola	nucleus	26.6	34.73
KRH25541	Soybean	nucleus	34.73	34.64
GSMUA_Achr7P19320_001	Banana	nucleus	12.07	32.03
HORVU6Hr1G060140.1	Barley	nucleus, plastid	43.6	32.01
GSMUA_Achr10P...	Banana	nucleus	21.92	31.9
GSMUA_Achr6P10440_001	Banana	nucleus	19.95	31.03
GSMUA_Achr9P13760_001	Banana	mitochondrion	11.58	30.92
GSMUA_AchrUn_...	Banana	nucleus	20.94	30.91
VIT_19s0014g03180.t01	Wine grape	nucleus	29.06	29.28
GSMUA_Achr10P...	Banana	nucleus	20.94	28.91
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	11.33	28.57
GSMUA_Achr3P01650_001	Banana	nucleus	23.15	28.48
GSMUA_Achr6P05210_001	Banana	nucleus	12.56	28.02
GSMUA_Achr10P...	Banana	mitochondrion	12.07	27.84
GSMUA_Achr8P28500_001	Banana	nucleus	17.98	26.26
GSMUA_Achr5P09470_001	Banana	nucleus	15.52	25.2
GSMUA_Achr1P27990_001	Banana	nucleus	15.27	25.0
GSMUA_Achr9P12950_001	Banana	nucleus	19.7	23.6
GSMUA_Achr7P10160_001	Banana	nucleus	11.82	23.3
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	11.33	23.12
GSMUA_Achr7P16060_001	Banana	mitochondrion	12.07	20.76
GSMUA_Achr10P...	Banana	nucleus	17.0	20.06
GSMUA_Achr4P02200_001	Banana	mitochondrion	11.08	19.31

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G26080_001	EnsemblPlants:GSMUA_Achr4P26080_001	EnsemblPlants:GSMUA_Achr4T26080_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SS69	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF19	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002958520	SEG:seg

Description

Putative Ethylene-responsive transcription factor ERF053 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26080_001]

Coordinates

chr4:+:25502642..25503925

Molecular Weight (calculated)

44730.0 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.690

Length

406 amino acids

Sequence
(BLAST)

001: MESEKNGGSR GRREMGKLQL VVPDGTRRIP PPPGSWEATR PLKKIRSPDR HRSPSSSSTS YSFDALSPAC SPRPFTSSRP IFPFACEGPQ PVLYAPPTLP
101: LPSSNQFHQQ QQQQMISFAR SHPYQIGAYP PSPLFMTEGA APVAMTRQQQ QMYQEQLLKY WSESLHLSPR GHFSGQERRR TLSSVYAGFF RPPMLPSVSA
201: PTKLYRGVRQ RHWGKWVAEI RLPKNRTRLW LGTFDTAEDA ALAYDREAFK LRGDNARLNF PNLFLGKGGD GGSSRGEASC SSLSSSAPAT PQESKQHQQQ
301: DEPRQSNIPS AVAETTTGGT TSSVDSPSPS EMVWEDADAA WFSTWGPGSS VWDDIDGANS LLFQSPLISI AESDMDCSSS SPACQETATT SASSNPYSPS
401: LFMWKE

Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)

001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI

Arabidopsis Description

ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.