Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69209 | Canola | nucleus | 94.89 | 95.5 |
| AT2G20880.1 | Thale cress | nucleus | 72.84 | 67.86 |
| CDY58717 | Canola | nucleus | 41.85 | 50.19 |
| CDY29884 | Canola | nucleus | 41.21 | 49.43 |
| CDX97423 | Canola | nucleus | 42.81 | 48.03 |
| CDY19002 | Canola | nucleus | 44.73 | 47.78 |
| CDY14255 | Canola | nucleus | 41.85 | 47.46 |
| CDX89202 | Canola | nucleus | 44.41 | 47.44 |
| CDY08817 | Canola | mitochondrion | 16.29 | 41.46 |
| KRH26929 | Soybean | nucleus | 43.45 | 32.23 |
| KRH22409 | Soybean | nucleus | 42.49 | 31.74 |
| KRH55997 | Soybean | nucleus | 40.26 | 31.27 |
| PGSC0003DMT400047265 | Potato | nucleus | 38.34 | 30.85 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 45.69 | 30.75 |
| KRH25541 | Soybean | nucleus | 39.62 | 30.47 |
| Solyc07g054220.1.1 | Tomato | nucleus | 37.38 | 30.0 |
| CDY31606 | Canola | nucleus | 23.0 | 27.69 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 35.46 | 27.34 |
| Zm00001d025910_P001 | Maize | nucleus | 35.14 | 27.23 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 39.3 | 27.09 |
| Os04t0529100-01 | Rice | nucleus | 32.59 | 27.06 |
| CDX72672 | Canola | nucleus | 22.04 | 26.85 |
| CDX90362 | Canola | nucleus | 22.04 | 26.74 |
| Zm00001d051239_P001 | Maize | nucleus | 38.02 | 26.74 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 38.66 | 26.65 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 38.66 | 26.59 |
| Zm00001d017366_P001 | Maize | nucleus | 38.02 | 26.5 |
| CDY65537 | Canola | mitochondrion | 14.38 | 26.16 |
| CDX69387 | Canola | nucleus | 22.04 | 26.14 |
| CDY14636 | Canola | nucleus, plastid | 20.77 | 26.0 |
| CDY21346 | Canola | nucleus | 21.41 | 25.77 |
| CDY42004 | Canola | nucleus | 21.73 | 25.76 |
| CDX89442 | Canola | plastid | 19.17 | 25.75 |
| Zm00001d002867_P001 | Maize | nucleus | 37.06 | 25.66 |
| CDY39455 | Canola | nucleus | 22.04 | 25.65 |
| OQU85375 | Sorghum | nucleus | 38.02 | 25.43 |
| CDX96845 | Canola | nucleus | 14.7 | 25.41 |
| CDX83982 | Canola | nucleus | 14.7 | 25.41 |
| CDY38238 | Canola | nucleus | 21.09 | 25.38 |
| Os02t0638650-01 | Rice | nucleus | 38.02 | 25.16 |
| CDX88163 | Canola | mitochondrion | 14.06 | 25.14 |
| CDY19812 | Canola | mitochondrion | 14.38 | 25.14 |
| CDY36551 | Canola | nucleus | 14.7 | 25.0 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 36.42 | 24.95 |
| KXG26694 | Sorghum | nucleus | 36.74 | 24.89 |
| CDX87096 | Canola | mitochondrion | 14.38 | 24.86 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 35.78 | 24.67 |
| CDY25578 | Canola | plastid | 18.53 | 24.58 |
| CDX87480 | Canola | nucleus | 21.41 | 24.54 |
| CDY05373 | Canola | mitochondrion | 14.38 | 24.46 |
| CDY05479 | Canola | mitochondrion | 14.38 | 24.32 |
| CDY39637 | Canola | nucleus | 14.7 | 24.08 |
| CDY33983 | Canola | nucleus | 21.09 | 24.0 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 35.14 | 23.86 |
| CDY67940 | Canola | nucleus | 14.38 | 23.68 |
| CDY14542 | Canola | nucleus | 21.09 | 23.4 |
| CDY08816 | Canola | nucleus | 21.09 | 23.4 |
| CDY31284 | Canola | nucleus | 20.77 | 23.38 |
| CDX73367 | Canola | nucleus | 23.96 | 23.36 |
| CDY26847 | Canola | nucleus | 23.0 | 23.15 |
| CDX68032 | Canola | nucleus | 23.64 | 23.05 |
| CDY48227 | Canola | nucleus | 23.64 | 23.05 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 29.39 | 22.83 |
| CDX69779 | Canola | nucleus | 13.42 | 22.46 |
| CDY19805 | Canola | nucleus | 13.1 | 22.28 |
| CDX88176 | Canola | nucleus | 13.42 | 22.22 |
| CDX80507 | Canola | nucleus | 13.42 | 22.22 |
| CDY68539 | Canola | mitochondrion, nucleus | 13.1 | 22.04 |
| CDX79244 | Canola | nucleus | 23.32 | 21.86 |
| CDX88414 | Canola | nucleus | 22.04 | 21.5 |
| CDX87089 | Canola | nucleus | 13.42 | 21.32 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 36.42 | 20.61 |
| CDY47850 | Canola | nucleus | 19.49 | 20.0 |
| CDY71425 | Canola | nucleus | 18.21 | 19.45 |
| CDY46525 | Canola | nucleus | 17.57 | 19.23 |
| CDY53558 | Canola | nucleus | 21.41 | 19.2 |
| CDY08372 | Canola | nucleus | 4.47 | 5.96 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078CYV0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX81987 |
| ProteinID:CDX81987 | ProteinID:CDX81987.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00136962001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF19 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE16BB | SEG:seg | : | : | : | : |
Description
BnaC08g36140D
Coordinates
chrLK031826:+:1791053..1791994
Molecular Weight (calculated)
36119.3 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.888
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAKNKGKS IMSFCTSEVE KMDHEMESEE ALQFKSKDNS GSDMWKPLVG ETSSTTLSQR SLRKIRTIDR HNPYLLSSSC VTPDQPPPPT TAFPFSLAPS
101: NIQNQQLFSY PRQMQMISFG PQRQVYPFLN AHQQQQQHMM QYWRDILNLP LPLQLARPIQ PFSATKLYRG VRQRHWGKWV AEIRKPRNRT RLWLGTFDTA
201: EEAAMAYDRE AFKLRGETAR LNFPDLFLNK QESTPLHQKQ SETPAAAEAS ERGNDDSSVA VGRVSDDTGW AEAWFNAIPE EWGQGSPLWD DYHFPISYNQ
301: KEDHEQDQPP RQK
101: NIQNQQLFSY PRQMQMISFG PQRQVYPFLN AHQQQQQHMM QYWRDILNLP LPLQLARPIQ PFSATKLYRG VRQRHWGKWV AEIRKPRNRT RLWLGTFDTA
201: EEAAMAYDRE AFKLRGETAR LNFPDLFLNK QESTPLHQKQ SETPAAAEAS ERGNDDSSVA VGRVSDDTGW AEAWFNAIPE EWGQGSPLWD DYHFPISYNQ
301: KEDHEQDQPP RQK
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.