Factsheet for GSMUA_Achr1P27990_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P09470_001	Banana	nucleus	58.87	58.4
Os05t0572000-00	Rice	nucleus	49.19	44.69
Zm00001d009622_P001	Maize	plastid	45.97	43.35
Zm00001d039077_P001	Maize	plastid	47.98	41.46
TraesCS1A01G411100.1	Wheat	plastid	47.58	41.4
TraesCS1D01G418900.1	Wheat	plastid	47.18	41.34
TraesCS1B01G441300.1	Wheat	plastid	46.77	41.13
EES19973	Sorghum	plastid	49.6	40.73
HORVU1Hr1G090250.1	Barley	plastid	47.58	39.86
PGSC0003DMT400031685	Potato	nucleus	41.13	34.69
VIT_02s0025g01360.t01	Wine grape	nucleus	36.69	34.47
Solyc08g082210.2.1	Tomato	nucleus	36.29	34.09
CDY46525	Canola	nucleus	38.71	33.57
CDY71425	Canola	nucleus	39.11	33.11
KRH77640	Soybean	nucleus	41.53	32.8
CDY47850	Canola	nucleus	40.32	32.79
Bra027697.1-P	Field mustard	nucleus	39.92	32.04
Bra027736.1-P	Field mustard	nucleus	39.11	31.8
PGSC0003DMT400014953	Potato	nucleus	39.52	31.41
KRH27850	Soybean	nucleus	41.13	31.38
GSMUA_Achr9P13760_001	Banana	mitochondrion	18.95	30.92
GSMUA_Achr7P19320_001	Banana	nucleus	18.55	30.07
AT1G64380.1	Thale cress	nucleus	40.32	29.85
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	17.74	27.33
GSMUA_Achr10P...	Banana	mitochondrion	18.95	26.7
GSMUA_Achr6P10440_001	Banana	nucleus	26.61	25.29
GSMUA_Achr10P...	Banana	nucleus	27.42	24.37
GSMUA_AchrUn_...	Banana	nucleus	27.02	24.36
GSMUA_Achr10P...	Banana	nucleus	27.42	23.13
GSMUA_Achr6P05210_001	Banana	nucleus	16.94	23.08
GSMUA_Achr8P28500_001	Banana	nucleus	25.81	23.02
GSMUA_Achr3P04360_001	Banana	nucleus	22.98	22.8
CDY08372	Canola	nucleus	19.76	20.85
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	16.13	20.1
GSMUA_Achr3P01650_001	Banana	nucleus	26.61	20.0
GSMUA_Achr7P10160_001	Banana	nucleus	16.53	19.9
GSMUA_Achr9P12950_001	Banana	nucleus	26.21	19.17
GSMUA_Achr7P16060_001	Banana	mitochondrion	18.15	19.07
GSMUA_Achr4P02200_001	Banana	mitochondrion	17.34	18.45
GSMUA_Achr4P26080_001	Banana	nucleus	25.0	15.27
GSMUA_Achr10P...	Banana	nucleus	19.35	13.95
GSMUA_Achr8P14110_001	Banana	nucleus	20.56	12.81

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G27990_001	EnsemblPlants:GSMUA_Achr1P27990_001	EnsemblPlants:GSMUA_Achr1T27990_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0S3Q6	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002953948	SEG:seg

Description

Putative AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G27990_001]

Coordinates

chr1:-:26764792..26765538

Molecular Weight (calculated)

27772.9 Da

IEP (calculated)

10.030

GRAVY (calculated)

-0.648

Length

248 amino acids

Sequence
(BLAST)

001: MVDRTLETPL PAEFPREFTS SPLDILLCGT TPLRAARSAA ALSIGSSVYH RQAELLRRFS THYHHCGASK DAVASAAETG EKRKVYRGVR QRQWGKWVAE
101: IRLPQNRTRI WLGTYYSPES AAYAYDRAAY KLRGEYARLN FPALQDAGDC PERLRPLQSA VDSKIQAIYQ RLGRRRGAMR DAAVGKKEKS AEEKNRRKKK
201: KNRVTSPTTS SSCAPASSES LAGEMDGECS FSLLPSYDPE LIWEVLAN

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.