Factsheet for Solyc08g082210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031685	Potato	nucleus	91.29	81.97
Solyc06g053240.2.1	Tomato	nucleus	6.44	54.84
VIT_02s0025g01360.t01	Wine grape	nucleus	54.55	54.55
KRH77640	Soybean	nucleus	59.47	50.0
KRH27850	Soybean	nucleus	55.68	45.23
Bra027736.1-P	Field mustard	nucleus	49.24	42.62
Bra027697.1-P	Field mustard	nucleus	49.62	42.39
AT1G64380.1	Thale cress	nucleus	51.52	40.6
GSMUA_Achr5P09470_001	Banana	nucleus	37.12	39.2
GSMUA_Achr1P27990_001	Banana	nucleus	34.09	36.29
Zm00001d009622_P001	Maize	plastid	35.98	36.12
Os05t0572000-00	Rice	nucleus	37.12	35.9
TraesCS1B01G441300.1	Wheat	plastid	36.36	34.04
TraesCS1A01G411100.1	Wheat	plastid	36.74	34.04
TraesCS1D01G418900.1	Wheat	plastid	36.36	33.92
Zm00001d039077_P001	Maize	plastid	36.36	33.45
EES19973	Sorghum	plastid	37.12	32.45
HORVU1Hr1G090250.1	Barley	plastid	36.36	32.43
CDY08372	Canola	nucleus	27.65	31.06
Solyc03g117130.2.1	Tomato	mitochondrion, nucleus	18.18	29.63
Solyc04g072900.1.1	Tomato	nucleus	28.03	28.03
Solyc12g056980.1.1	Tomato	nucleus	29.17	25.08
Solyc04g054910.2.1	Tomato	nucleus	26.14	24.82
Solyc03g116610.2.1	Tomato	nucleus	18.56	24.26
Solyc06g068360.2.1	Tomato	mitochondrion, nucleus	16.29	23.76
Solyc06g065820.2.1	Tomato	mitochondrion	17.05	22.06
Solyc12g009490.1.1	Tomato	nucleus	17.8	21.17
Solyc09g091950.1.1	Tomato	extracellular, nucleus	26.14	16.47
Solyc07g054220.1.1	Tomato	nucleus	22.73	15.38
Solyc12g013660.1.1	Tomato	nucleus	20.45	15.3

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K4CPL7
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF20	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:Solyc08g082210.2	EnsemblPlants:Solyc08g082210.2.1	UniParc:UPI000276C4C7	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:65055339..65056646

Molecular Weight (calculated)

30144.8 Da

IEP (calculated)

9.832

GRAVY (calculated)

-0.658

Length

264 amino acids

Sequence
(BLAST)

001: MDRIQENNSM SSIFDEGAQI RSSLSQLILT SSTNTFDTIF SHCQENNQMS NSPVFEPLGT SVYLRQRDLL QKFCQENIAN ISIPTTSKTI PFRNSLYTQS
101: YKLPEKKKLY RGVRQRHWGK WVAEIRLPQN RMRVWLGTYE TAEAAAYAYD RAAYKLRGEY ARLNFPNVRD PSKLGFGDGE KMNAVKNAVD AKIQAICQRV
201: KREKAKKAAK KKSENESKVK ETMDSSSSTT TTTMISPSVS EDGLWRSEDS TFVHLQECLL LILN

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.