Factsheet for TraesCS1A01G411100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G418900.1	Wheat	plastid	95.79	96.47
TraesCS1B01G441300.1	Wheat	plastid	94.04	95.04
HORVU1Hr1G090250.1	Barley	plastid	91.58	88.18
Os05t0572000-00	Rice	nucleus	73.68	76.92
EES19973	Sorghum	plastid	72.63	68.54
Zm00001d039077_P001	Maize	plastid	65.96	65.51
Zm00001d009622_P001	Maize	plastid	60.0	65.02
GSMUA_Achr5P09470_001	Banana	nucleus	44.21	50.4
GSMUA_Achr1P27990_001	Banana	nucleus	41.4	47.58
VIT_02s0025g01360.t01	Wine grape	nucleus	34.39	37.12
CDY46525	Canola	nucleus	37.19	37.06
CDY71425	Canola	nucleus	37.89	36.86
Solyc08g082210.2.1	Tomato	nucleus	34.04	36.74
CDY47850	Canola	nucleus	38.95	36.39
PGSC0003DMT400031685	Potato	nucleus	37.19	36.05
Bra027736.1-P	Field mustard	nucleus	38.25	35.74
KRH77640	Soybean	nucleus	38.6	35.03
Bra027697.1-P	Field mustard	nucleus	37.89	34.95
PGSC0003DMT400014953	Potato	nucleus	37.54	34.29
AT1G64380.1	Thale cress	nucleus	40.0	34.03
KRH27850	Soybean	nucleus	38.25	33.54
TraesCS6A01G360300.1	Wheat	mitochondrion	16.84	28.92
TraesCS2A01G503100.1	Wheat	mitochondrion	15.09	27.39
CDY08372	Canola	nucleus	22.46	27.23
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	15.79	27.11
TraesCS4A01G035400.2	Wheat	nucleus	25.61	25.98
TraesCS6A01G301900.1	Wheat	nucleus	25.96	22.56
TraesCS6A01G181400.2	Wheat	nucleus	15.79	21.74
TraesCS7A01G376300.1	Wheat	nucleus	16.14	20.26
TraesCS7A01G180900.1	Wheat	nucleus, plastid	25.61	20.17
TraesCS6A01G235100.1	Wheat	nucleus	25.96	16.05
TraesCS2A01G373700.1	Wheat	nucleus	24.56	15.42

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009987
GO:GO:0010200	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF20	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS1A01G411100	EnsemblPlants:TraesCS1A01G411100.1
TIGR:cd00018	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:571894827..571895684

Molecular Weight (calculated)

31020.5 Da

IEP (calculated)

10.184

GRAVY (calculated)

-0.433

Length

285 amino acids

Sequence
(BLAST)

001: MDASLRTLSP SSFTGEVRSA LSSLLLSPGG ATALDTVFSH LPPPVTIPPL GSSVYYRQSE LLRSFAATQP HHHLAAAASS SSGYALPFPG AASQDAAAAA
101: AGRKMYRGVR QRQWGKWVAE IRLPQNRVRV WLGTYDSPET AAHAYDRAAY RLRGEYARLN FPGVMDGADD ARFPNALRQL RDAVDAKIQA IRVRMARKRA
201: RARRLREEAK QQQNSNTQRA ASAEAAPAPP TAPRPVVSES ATTSETTTTS SYGSPEGVLS SADFECSLQR MPSFDPELIW EMLNF

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.