Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G503900.1 | Wheat | mitochondrion | 97.45 | 98.08 |
| TraesCS2B01G531100.1 | Wheat | mitochondrion | 94.27 | 95.48 |
| EES12999 | Sorghum | mitochondrion | 66.88 | 61.05 |
| Zm00001d026486_P001 | Maize | mitochondrion | 64.97 | 59.3 |
| Os04t0655700-00 | Rice | nucleus | 47.77 | 49.02 |
| TraesCS6A01G360300.1 | Wheat | mitochondrion | 50.32 | 47.59 |
| TraesCS7A01G145800.1 | Wheat | mitochondrion, nucleus | 48.41 | 45.78 |
| Zm00001d002011_P001 | Maize | mitochondrion, nucleus | 48.41 | 44.71 |
| GSMUA_Achr4P02200_001 | Banana | mitochondrion | 57.32 | 38.63 |
| TraesCS6A01G181400.2 | Wheat | nucleus | 41.4 | 31.4 |
| TraesCS7A01G376300.1 | Wheat | nucleus | 42.68 | 29.52 |
| TraesCS4A01G035400.2 | Wheat | nucleus | 29.3 | 16.37 |
| TraesCS6A01G301900.1 | Wheat | nucleus | 32.48 | 15.55 |
| TraesCS1A01G411100.1 | Wheat | plastid | 27.39 | 15.09 |
| TraesCS7A01G180900.1 | Wheat | nucleus, plastid | 31.21 | 13.54 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 28.03 | 9.69 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 27.39 | 9.33 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF4 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2A01G503100 | EnsemblPlants:TraesCS2A01G503100.1 |
| TIGR:cd00018 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:732580319..732580920
Molecular Weight (calculated)
17117.4 Da
IEP (calculated)
8.641
GRAVY (calculated)
-0.432
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKLQRYRGV RQRHWGSWVS EIRHPLMKTR IWLGTYETAE DAARAYDEAA RLMSGPAART NFPSSTNGVA PAGAGGLSAT LRAKLEKCCM ATAPPVQNVE
101: ATKAARTGGG AARRNRVEDV VKRVDEEEEC IEEMIRELTH YGSVEIVAPS ACSSSVV
101: ATKAARTGGG AARRNRVEDV VKRVDEEEEC IEEMIRELTH YGSVEIVAPS ACSSSVV
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.