Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G503900.1 | Wheat | mitochondrion | 96.77 | 96.15 |
| TraesCS2A01G503100.1 | Wheat | mitochondrion | 95.48 | 94.27 |
| TraesCS2B01G530800.1 | Wheat | nucleus | 72.9 | 74.83 |
| EES12999 | Sorghum | mitochondrion | 67.1 | 60.47 |
| Zm00001d026486_P001 | Maize | mitochondrion | 65.81 | 59.3 |
| Os04t0655700-00 | Rice | nucleus | 48.39 | 49.02 |
| TraesCS6B01G393200.1 | Wheat | mitochondrion | 50.32 | 45.88 |
| TraesCS7B01G048100.1 | Wheat | mitochondrion | 47.74 | 45.68 |
| Zm00001d002011_P001 | Maize | mitochondrion, nucleus | 49.03 | 44.71 |
| GSMUA_Achr4P02200_001 | Banana | mitochondrion | 57.42 | 38.2 |
| TraesCS6B01G210300.1 | Wheat | nucleus | 41.94 | 31.4 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 43.23 | 29.78 |
| TraesCS5B01G193200.1 | Wheat | nucleus | 32.26 | 17.61 |
| TraesCS4B01G268100.1 | Wheat | nucleus | 29.68 | 17.42 |
| TraesCS1B01G441300.1 | Wheat | plastid | 28.39 | 15.6 |
| TraesCS6B01G331000.1 | Wheat | nucleus | 32.26 | 15.02 |
| TraesCS7B01G085900.1 | Wheat | nucleus, plastid | 31.61 | 13.32 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 28.39 | 9.69 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 27.74 | 9.47 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF4 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2B01G531100 | EnsemblPlants:TraesCS2B01G531100.1 |
| TIGR:cd00018 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:726545793..726546399
Molecular Weight (calculated)
16965.2 Da
IEP (calculated)
8.489
GRAVY (calculated)
-0.405
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKLQRYRGV RQRHWGSWVS EIRHPLMKTR IWLGTYETAE DAARAYDEAA RLMSGPAART NFPSTNGVAA AGGCLSATLR AKLEKCCMST PAPVQNVEAA
101: KAARTGGGAA RRNRVEDVVK RVDEEEECIE EMIRELTHYG SVEIVAPSAC SSSVV
101: KAARTGGGAA RRNRVEDVVK RVDEEEECIE EMIRELTHYG SVEIVAPSAC SSSVV
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.