Factsheet for TraesCS6A01G181400.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G210300.1	Wheat	nucleus	99.52	99.52
HORVU6Hr1G038120.3	Barley	nucleus	98.55	99.03
Os02t0202000-01	Rice	nucleus	81.64	82.44
KXG29745	Sorghum	nucleus	82.61	80.28
Zm00001d015759_P001	Maize	nucleus	81.64	79.34
TraesCS7A01G376300.1	Wheat	nucleus	77.29	70.48
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	66.67	69.35
GSMUA_Achr7P10160_001	Banana	nucleus	67.15	67.48
KRH09737	Soybean	nucleus	56.04	65.91
VIT_09s0002g06750.t01	Wine grape	mitochondrion	56.04	62.7
PGSC0003DMT400007494	Potato	nucleus	58.94	60.4
VIT_11s0016g05340.t01	Wine grape	nucleus	58.94	59.8
KRH62994	Soybean	nucleus	59.9	56.88
KRH54960	Soybean	nucleus	57.97	54.79
Solyc12g009490.1.1	Tomato	nucleus	58.45	54.5
KRH20262	Soybean	nucleus	61.35	53.36
KRH03696	Soybean	nucleus	60.87	52.72
TraesCS6A01G360300.1	Wheat	mitochondrion	33.33	41.57
TraesCS2A01G503100.1	Wheat	mitochondrion	31.4	41.4
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	32.85	40.96
TraesCS4A01G035400.2	Wheat	nucleus	24.15	17.79
TraesCS1A01G411100.1	Wheat	plastid	21.74	15.79
TraesCS6A01G301900.1	Wheat	nucleus	24.15	15.24
TraesCS7A01G180900.1	Wheat	nucleus, plastid	23.19	13.26
TraesCS2A01G373700.1	Wheat	nucleus	23.19	10.57
TraesCS6A01G235100.1	Wheat	nucleus	23.19	10.41

Protein Annotations

MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF12	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS6A01G181400	EnsemblPlants:TraesCS6A01G181400.2
TIGR:cd00018	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:206351754..206352502

Molecular Weight (calculated)

22215.1 Da

IEP (calculated)

10.033

GRAVY (calculated)

-0.495

Length

207 amino acids

Sequence
(BLAST)

001: MVQPKKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDEA AVLMSGRNAK TNFPVQRSST GDPAPAATRD VRGGSSSSST SNLSQVLSAK
101: LRKCCKAPSP SLTCLRLDTE KSHIGVWQKR AGARADSNWV MTVELNKGAG PSGDAVAAQS TVSATTASSP ASTMDDEERL TLQMIEELLS SSGPASPSHG
201: EEGSFVV

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.