Factsheet for TraesCS6A01G360300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G343800.1	Wheat	mitochondrion	97.59	95.29
TraesCS6B01G393200.1	Wheat	mitochondrion	96.39	94.12
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	24.7	93.18
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	67.47	67.47
GSMUA_Achr7P19320_001	Banana	nucleus	58.43	63.4
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	55.42	57.14
CDY65537	Canola	mitochondrion	54.82	52.91
GSMUA_Achr10P...	Banana	mitochondrion	56.02	52.84
Bra020490.1-P	Field mustard	mitochondrion	54.22	51.43
VIT_09s0002g09120.t01	Wine grape	nucleus	54.22	51.43
KRH09667	Soybean	mitochondrion, nucleus	54.82	51.12
CDX88163	Canola	mitochondrion	53.61	50.86
TraesCS2A01G503100.1	Wheat	mitochondrion	47.59	50.32
CDX87096	Canola	mitochondrion	54.82	50.28
AT5G25190.1	Thale cress	mitochondrion	54.82	50.28
VIT_04s0008g06000.t01	Wine grape	mitochondrion	56.63	50.27
CDY19812	Canola	mitochondrion	53.61	49.72
Bra036536.1-P	Field mustard	mitochondrion	53.61	49.72
VIT_09s0002g09140.t01	Wine grape	nucleus	53.01	49.72
CDY05479	Canola	mitochondrion	54.82	49.19
CDY05373	Canola	mitochondrion	54.22	48.91
KRH61698	Soybean	mitochondrion, nucleus	56.63	48.7
KRH05258	Soybean	nucleus	59.04	48.51
KRH52366	Soybean	mitochondrion, nucleus	56.63	48.45
KRH47384	Soybean	mitochondrion, nucleus	56.63	48.45
KRH44522	Soybean	mitochondrion	56.63	48.21
KRH15790	Soybean	nucleus	56.63	47.24
Bra009824.1-P	Field mustard	mitochondrion	54.22	46.88
KRH12836	Soybean	nucleus	35.54	46.46
PGSC0003DMT400067218	Potato	mitochondrion	53.61	45.41
VIT_07s0031g00420.t01	Wine grape	nucleus	25.3	43.75
Solyc06g065820.2.1	Tomato	mitochondrion	53.61	43.63
GSMUA_Achr7P16060_001	Banana	mitochondrion	58.43	41.1
KRH23632	Soybean	nucleus	54.22	39.82
TraesCS6A01G181400.2	Wheat	nucleus	41.57	33.33
TraesCS7A01G376300.1	Wheat	nucleus	40.36	29.52
TraesCS4A01G035400.2	Wheat	nucleus	30.72	18.15
TraesCS1A01G411100.1	Wheat	plastid	28.92	16.84
TraesCS6A01G301900.1	Wheat	nucleus	33.13	16.77
TraesCS7A01G180900.1	Wheat	nucleus, plastid	30.12	13.81
TraesCS2A01G373700.1	Wheat	nucleus	29.52	10.79
TraesCS6A01G235100.1	Wheat	nucleus	29.52	10.63

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF19	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS6A01G360300	EnsemblPlants:TraesCS6A01G360300.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:591380588..591381199

Molecular Weight (calculated)

17806.1 Da

IEP (calculated)

9.345

GRAVY (calculated)

-0.161

Length

166 amino acids

Sequence
(BLAST)

001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCGQRAR TNFPAATGSV SSSAAVASSF LSAALVAKLH RFNMASVQAA
101: QRQREAAAAS ASAAAATAAA MPPGAAHAGP TLPSSTGWVG TLLEEKHVEQ MIAELLDSDF SMEICH

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.