CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44522	Soybean	mitochondrion	95.36	94.87
KRH09667	Soybean	mitochondrion, nucleus	76.8	83.71
VIT_04s0008g06000.t01	Wine grape	mitochondrion	65.46	67.91
CDY65537	Canola	mitochondrion	59.79	67.44
KRH23632	Soybean	nucleus	77.32	66.37
Bra020490.1-P	Field mustard	mitochondrion	59.79	66.29
AT5G25190.1	Thale cress	mitochondrion	61.34	65.75
CDX88163	Canola	mitochondrion	59.28	65.71
KRH12836	Soybean	nucleus	42.27	64.57
GSMUA_Achr7P19320_001	Banana	nucleus	50.52	64.05
CDX87096	Canola	mitochondrion	59.28	63.54
CDY05479	Canola	mitochondrion	60.31	63.24
KRH61698	Soybean	mitochondrion, nucleus	62.89	63.21
KRH52366	Soybean	mitochondrion, nucleus	62.89	62.89
CDY19812	Canola	mitochondrion	57.73	62.57
Bra036536.1-P	Field mustard	mitochondrion	57.73	62.57
CDY05373	Canola	mitochondrion	59.28	62.5
Bra009824.1-P	Field mustard	mitochondrion	60.82	61.46
KRH15790	Soybean	nucleus	60.82	59.3
KRH05258	Soybean	nucleus	60.82	58.42
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	48.45	58.39
OQU85888	Sorghum	mitochondrion	46.39	58.06
Zm00001d052026_P001	Maize	mitochondrion	45.88	57.79
PGSC0003DMT400067218	Potato	mitochondrion	58.25	57.65
TraesCS6A01G360300.1	Wheat	mitochondrion	48.45	56.63
Solyc06g065820.2.1	Tomato	mitochondrion	58.76	55.88
TraesCS6D01G343800.1	Wheat	mitochondrion	47.94	54.71
TraesCS6B01G393200.1	Wheat	mitochondrion	47.94	54.71
GSMUA_Achr10P...	Banana	mitochondrion	48.97	53.98
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	45.88	53.61
Os02t0797100-00	Rice	mitochondrion	47.42	53.49
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	44.85	53.37
Zm00001d045120_P001	Maize	mitochondrion	46.39	53.25
TraesCS7B01G048100.1	Wheat	mitochondrion	44.33	53.09
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	44.85	53.05
Os06t0181700-01	Rice	mitochondrion	48.45	52.81
Zm00001d035835_P001	Maize	mitochondrion	45.88	51.45
EER87969	Sorghum	mitochondrion	46.39	49.72
KRH09737	Soybean	nucleus	38.66	42.61
GSMUA_Achr7P16060_001	Banana	mitochondrion	48.97	40.25
KRH47461	Soybean	nucleus	39.18	40.21
KRH44444	Soybean	nucleus	40.21	39.0
KRH52445	Soybean	nucleus	36.08	37.84
KRH61776	Soybean	nucleus	37.11	37.5
KRH05157	Soybean	nucleus	37.63	36.68
KRH54960	Soybean	nucleus	39.69	35.16
KRH62994	Soybean	nucleus	38.66	34.4
KRH20262	Soybean	nucleus	40.21	32.77
KRH03696	Soybean	nucleus	40.21	32.64
HORVU7Hr1G029870.1	Barley	mitochondrion	25.77	21.1
KRH53092	Soybean	nucleus	29.38	18.87
KRH18890	Soybean	nucleus	29.9	18.65
KRH62373	Soybean	nucleus	29.9	18.47
KRH16699	Soybean	nucleus	29.38	18.27
KRG97594	Soybean	nucleus	27.84	17.48
KRH31278	Soybean	nucleus	28.35	17.3
KRH43213	Soybean	nucleus	27.32	16.99
KRH59367	Soybean	nucleus	27.32	16.99
KRH77640	Soybean	nucleus	25.77	15.92
KRH27850	Soybean	nucleus	26.29	15.69
KRH34596	Soybean	nucleus	25.26	12.66
KRG92191	Soybean	nucleus	24.74	11.76
KRH25541	Soybean	nucleus	24.23	11.55
KRH22409	Soybean	nucleus	24.74	11.46
KRH55997	Soybean	nucleus	23.71	11.41
KRH26929	Soybean	nucleus	23.71	10.9

Protein Annotations

EntrezGene:100777851	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02004148	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EMBL:BT092783	UniProt:C6T5S0	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_07G025800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH47384
ProteinID:KRH47384	ProteinID:KRH47384.1	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001B15EE8	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:2020503..2021932

Molecular Weight (calculated)

21996.8 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.748

Length

194 amino acids

Sequence
(BLAST)

001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPKAR TNFPYNPNEP HSSSSKLLSA TLTAKLHKCH MASLSLQMAK
101: QKPPQNKEPQ PSHGSNPFAS ANAIAGSSAD TSFRWPDNRH EEFRWLEGNW VGVEGQVEVS NQQFQPVLED DHIEQMIQEL LDYGSIELCP VSST

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.