Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G147100.1 | Wheat | mitochondrion, nucleus | 100.0 | 99.39 |
| TraesCS7A01G145800.1 | Wheat | mitochondrion, nucleus | 97.55 | 95.78 |
| TraesCS7B01G048100.1 | Wheat | mitochondrion | 92.64 | 93.21 |
| VIT_04s0043g00510.t01 | Wine grape | mitochondrion, nucleus | 25.15 | 93.18 |
| Zm00001d045120_P001 | Maize | mitochondrion | 73.01 | 70.41 |
| Os06t0181700-01 | Rice | mitochondrion | 73.01 | 66.85 |
| Zm00001d035835_P001 | Maize | mitochondrion | 70.55 | 66.47 |
| EER87969 | Sorghum | mitochondrion | 73.01 | 65.75 |
| TraesCS6D01G343800.1 | Wheat | mitochondrion | 67.48 | 64.71 |
| GSMUA_Achr7P19320_001 | Banana | nucleus | 55.83 | 59.48 |
| GSMUA_Achr5P22840_001 | Banana | mitochondrion, nucleus | 52.15 | 52.8 |
| CDY65537 | Canola | mitochondrion | 53.99 | 51.16 |
| GSMUA_Achr10P... | Banana | mitochondrion | 55.21 | 51.14 |
| KRH09667 | Soybean | mitochondrion, nucleus | 55.83 | 51.12 |
| Bra020490.1-P | Field mustard | mitochondrion | 54.6 | 50.86 |
| VIT_04s0008g06000.t01 | Wine grape | mitochondrion | 57.06 | 49.73 |
| CDX88163 | Canola | mitochondrion | 53.37 | 49.71 |
| VIT_09s0002g09120.t01 | Wine grape | nucleus | 52.15 | 48.57 |
| CDY05479 | Canola | mitochondrion | 54.6 | 48.11 |
| TraesCS2D01G503900.1 | Wheat | mitochondrion | 46.01 | 48.08 |
| CDX87096 | Canola | mitochondrion | 53.37 | 48.07 |
| AT5G25190.1 | Thale cress | mitochondrion | 53.37 | 48.07 |
| CDY19812 | Canola | mitochondrion | 52.76 | 48.04 |
| Bra036536.1-P | Field mustard | mitochondrion | 52.76 | 48.04 |
| CDY05373 | Canola | mitochondrion | 53.99 | 47.83 |
| VIT_09s0002g09140.t01 | Wine grape | nucleus | 50.92 | 46.89 |
| TraesCS2D01G503100.1 | Wheat | nucleus | 42.94 | 46.67 |
| VIT_07s0031g00420.t01 | Wine grape | nucleus | 26.99 | 45.83 |
| Bra009824.1-P | Field mustard | mitochondrion | 53.99 | 45.83 |
| KRH61698 | Soybean | mitochondrion, nucleus | 53.99 | 45.6 |
| KRH52366 | Soybean | mitochondrion, nucleus | 53.37 | 44.85 |
| KRH47384 | Soybean | mitochondrion, nucleus | 53.37 | 44.85 |
| KRH44522 | Soybean | mitochondrion | 53.37 | 44.62 |
| KRH05258 | Soybean | nucleus | 55.21 | 44.55 |
| KRH15790 | Soybean | nucleus | 53.99 | 44.22 |
| PGSC0003DMT400067218 | Potato | mitochondrion | 52.15 | 43.37 |
| KRH12836 | Soybean | nucleus | 33.13 | 42.52 |
| Solyc06g065820.2.1 | Tomato | mitochondrion | 52.76 | 42.16 |
| GSMUA_Achr7P16060_001 | Banana | mitochondrion | 57.67 | 39.83 |
| KRH23632 | Soybean | nucleus | 54.6 | 39.38 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 42.33 | 30.4 |
| TraesCS7D01G469200.1 | Wheat | nucleus | 26.38 | 25.75 |
| TraesCS5D01G200900.2 | Wheat | nucleus | 32.52 | 18.66 |
| TraesCS4D01G267500.1 | Wheat | nucleus | 31.29 | 18.15 |
| TraesCS1D01G418900.1 | Wheat | plastid | 28.22 | 16.25 |
| TraesCS6D01G281200.1 | Wheat | nucleus | 30.67 | 15.02 |
| TraesCS7D01G182700.1 | Wheat | nucleus, plastid | 32.52 | 14.48 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 29.45 | 10.55 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 29.45 | 10.5 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 |
| PANTHER:PTHR31194:SF39 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS7D01G147200 | EnsemblPlants:TraesCS7D01G147200.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:94005550..94006132
Molecular Weight (calculated)
17814.7 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.437
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCGPRVR TNFPDDAAPS SSFLSPALVA KLHRFNVACG SQAGQQQDKD
101: ASTSSVGVDP RSPPAPFAGY TGNASAAAAS AAAGWSGGFL EEQYVEQMIE ELLDSNFSME ISY
101: ASTSSVGVDP RSPPAPFAGY TGNASAAAAS AAAGWSGGFL EEQYVEQMIE ELLDSNFSME ISY
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.