Factsheet for TraesCS7D01G182700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G180900.1	Wheat	nucleus, plastid	94.81	95.86
TraesCS7B01G085900.1	Wheat	nucleus, plastid	93.44	92.93
HORVU7Hr1G037180.1	Barley	nucleus, plastid	91.26	90.03
Zm00001d044857_P001	Maize	nucleus	64.21	67.34
EER89448	Sorghum	nucleus	67.21	67.03
TraesCS6D01G281200.1	Wheat	nucleus	57.38	63.06
TraesCS7D01G469200.1	Wheat	nucleus	24.59	53.89
GSMUA_Achr3P04360_001	Banana	nucleus	35.25	51.6
TraesCS5D01G200900.2	Wheat	nucleus	38.8	50.0
TraesCS4D01G267500.1	Wheat	nucleus	33.06	43.06
AT1G36060.1	Thale cress	nucleus	33.61	39.17
CDX73367	Canola	nucleus	34.15	38.94
CDY48227	Canola	nucleus	33.61	38.32
Bra040381.1-P	Field mustard	nucleus	33.61	38.32
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	14.48	32.52
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	14.48	32.32
TraesCS2D01G503900.1	Wheat	mitochondrion	13.39	31.41
TraesCS6D01G343800.1	Wheat	mitochondrion	13.66	29.41
TraesCS2D01G503100.1	Wheat	nucleus	12.02	29.33
TraesCS1D01G418900.1	Wheat	plastid	19.95	25.8
TraesCS7D01G372700.1	Wheat	nucleus	13.39	21.59
TraesCS6D01G217800.1	Wheat	nucleus	25.96	20.79
TraesCS2D01G369900.1	Wheat	nucleus	24.32	19.56

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF21	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS7D01G182700	EnsemblPlants:TraesCS7D01G182700.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr7D:-:136204145..136205245

Molecular Weight (calculated)

38990.9 Da

IEP (calculated)

7.015

GRAVY (calculated)

-0.477

Length

366 amino acids

Sequence
(BLAST)

001: MAAIDLYGAA NQFSSSSSSS SSDQELMRAL EPFIRSASSP TSSTSTSTSP FSFYATSTST SSPFSYYSSS SLPQESCYLP ASSSYSYTTL QAPFAPTAAT
101: TTSSSFSQLP PLPPTSQYSA SPAAAYPSAG DAVGLASLGP EQIHQIQAQL FLQQQQQQQQ QQQRGLSASL LGPRAQPMKQ AGAPSAGKLY RGVRQRHWGK
201: WVAEIRLPKN RTRLWLGTFD TAEDAALAYD KAAFRLRGDA ARLNFPNLRR GGAHLAGPLH ASVNAKLDSI CQTIAAPAPS SKSSPPDSPK ASTSTSSTEG
301: DGSVLSAGST PLPPQSSQHQ QPAAPLHEMA KLDFSEAPWD ESDAFHLHQD LHKCPSWEID WDSILS

Best Arabidopsis Sequence Match ( AT1G22190.1 )
(BLAST)

001: MTTSMDFYSN KTFQQSDPFG GELMEALLPF IKSPSNDSSA FAFSLPAPIS YGSDLHSFSH HLSPKPVSMK QTGTSAAKPT KLYRGVRQRH WGKWVAEIRL
101: PRNRTRLWLG TFDTAEEAAL AYDKAAYKLR GDFARLNFPD LRHNDEYQPL QSSVDAKLEA ICQNLAETTQ KQVRSTKKSS SRKRSSTVAV KLPEEDYSSA
201: GSSPLLTESY GSGGSSSPLS ELTFGDTEEE IQPPWNENAL EKYPSYEIDW DSILQCSSLV N

Arabidopsis Description

RAP2-13Ethylene-responsive transcription factor RAP2-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.