Factsheet for HORVU6Hr1G038120.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G181400.2	Wheat	nucleus	99.03	98.55
TraesCS6B01G210300.1	Wheat	nucleus	98.54	98.07
Os02t0202000-01	Rice	nucleus	82.04	82.44
KXG29745	Sorghum	nucleus	82.04	79.34
Zm00001d015759_P001	Maize	nucleus	81.07	78.4
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	66.99	69.35
GSMUA_Achr7P10160_001	Banana	nucleus	67.48	67.48
KRH09737	Soybean	nucleus	56.31	65.91
VIT_09s0002g06750.t01	Wine grape	mitochondrion	55.83	62.16
PGSC0003DMT400007494	Potato	nucleus	59.22	60.4
VIT_11s0016g05340.t01	Wine grape	nucleus	58.74	59.31
KRH62994	Soybean	nucleus	60.19	56.88
KRH54960	Soybean	nucleus	58.25	54.79
Solyc12g009490.1.1	Tomato	nucleus	58.25	54.05
KRH20262	Soybean	nucleus	61.65	53.36
KRH03696	Soybean	nucleus	61.16	52.72
HORVU7Hr1G089930.7	Barley	nucleus, plastid	68.45	51.65
HORVU7Hr1G029870.1	Barley	mitochondrion	23.3	20.25
HORVU6Hr1G060220.1	Barley	nucleus	22.82	19.03
HORVU4Hr1G071890.3	Barley	nucleus	23.3	17.39
HORVU5Hr1G058270.1	Barley	nucleus	23.3	16.96
HORVU1Hr1G090250.1	Barley	plastid	21.84	15.2
HORVU6Hr1G074970.1	Barley	nucleus	24.27	15.15
HORVU7Hr1G037180.1	Barley	nucleus, plastid	23.3	12.94
HORVU6Hr1G060140.1	Barley	nucleus, plastid	24.27	9.04

Protein Annotations

MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	UniProt:A0A287TYK1	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU6Hr1G038120	EnsemblPlants:HORVU6Hr1G038120.3	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF12	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000B4674E3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:192957469..192960088

Molecular Weight (calculated)

22256.2 Da

IEP (calculated)

10.418

GRAVY (calculated)

-0.565

Length

206 amino acids

Sequence
(BLAST)

001: MVQPKKKFRG VRQRHWGSWV SEIRHPLRKR RVWLGTFETA EEAARAYDEA AVLMSGRNAK TNFPVQRSST GDPAPAATRD VRGGSSSSST SNLSQVLSAK
101: LRKCCKAPSP SLTCLRLDTE KSHIGVWQKR AGARADSNWV MTVELNKGAG PSGDAVAQST VSATTASSPA STMDDEERLT LQMIEELLSR SGPASPSHGE
201: EGSFVV

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.