Factsheet for Bra030255.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25578	Canola	plastid	99.58	99.58
AT2G22200.1	Thale cress	plastid	72.03	65.13
Bra011833.1-P	Field mustard	nucleus	61.02	52.17
Bra024357.1-P	Field mustard	mitochondrion	27.12	52.03
Bra017879.1-P	Field mustard	nucleus	56.78	51.54
Bra010657.1-P	Field mustard	nucleus	55.51	50.78
Solyc04g054910.2.1	Tomato	nucleus	43.22	36.69
Bra031371.1-P	Field mustard	nucleus	40.25	36.54
Bra024358.1-P	Field mustard	nucleus	43.64	36.52
Bra031880.1-P	Field mustard	nucleus	42.37	36.1
KRG97594	Soybean	nucleus	46.61	35.6
KRH31278	Soybean	nucleus	47.03	34.91
Bra003659.1-P	Field mustard	nucleus	44.92	33.33
Bra008343.1-P	Field mustard	nucleus	43.22	32.8
Bra015634.1-P	Field mustard	nucleus	43.22	31.1
PGSC0003DMT400053152	Potato	nucleus	45.76	29.19
VIT_00s0662g00040.t01	Wine grape	nucleus	44.92	28.34
Bra024222.1-P	Field mustard	nucleus	25.85	26.75
Bra008985.1-P	Field mustard	nucleus	21.19	26.74
Bra040381.1-P	Field mustard	nucleus	36.02	26.48
Bra036543.1-P	Field mustard	nucleus	20.34	26.23
Bra020490.1-P	Field mustard	mitochondrion	19.07	25.71
Bra016663.1-P	Field mustard	nucleus	21.61	25.5
Bra026140.1-P	Field mustard	nucleus	21.19	25.25
Bra036536.1-P	Field mustard	mitochondrion	18.64	24.58
Bra009824.1-P	Field mustard	mitochondrion	19.49	23.96
Bra010383.1-P	Field mustard	nucleus	27.54	23.55
Bra026280.1-P	Field mustard	nucleus	27.12	21.84
Bra027697.1-P	Field mustard	nucleus	28.39	21.68
Bra026770.1-P	Field mustard	nucleus	15.25	21.05
Bra027736.1-P	Field mustard	nucleus	27.12	20.98
Bra032724.1-P	Field mustard	nucleus	30.93	20.86
Bra009837.1-P	Field mustard	mitochondrion, nucleus	14.83	20.59
Bra031146.1-P	Field mustard	nucleus	22.88	17.36

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra030255	EnsemblPlants:Bra030255.1
EnsemblPlants:Bra030255.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EN85	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF9	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254401F	SEG:seg

Description

AT2G22200 (E=3e-081) | AP2 domain-containing transcription factor

Coordinates

chrA04:-:9596616..9597326

Molecular Weight (calculated)

26911.5 Da

IEP (calculated)

5.440

GRAVY (calculated)

-0.719

Length

236 amino acids

Sequence
(BLAST)

001: MESKPLGLNQ LTPYQTYQIQ KQLNHRRSTT STLSPNQILM KKLSPSSSNS QKLYKGVRQR HWGKWVAEIR LPKSRTRLWL GTFGTAEEAA LAYDQAAFQI
101: RGDIGKLNFP DIKHEEINSL PSSVDAKLQA ICQSLRNTEE TCSVSEKSED MCSVSDKTEL FLTKTEHMEM KFSDDSPRTD KNSLWDESKL ESSYSEQGIT
201: FLEFSDSEFD EIGRFGLGKF PSVEIDWDAI SKFSES

Best Arabidopsis Sequence Match ( AT2G22200.1 )
(BLAST)

001: METASLSFPV PNTSFGVNKS MPLGLNQLTP YQIHQIQNQL NHRRSTISNL SPNRIRMKNL TPSTSKTKNL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF
101: ETAEKAALAY DQAAFQLRGD IAKLNFPNLI HEDMNPLPSS VDTKLQAICK SLRKTEEICS VSDQTKEYSV YSVSDKTELF LPKAELFLPK REHLETNELS
201: NESPRSDETS LLDESQAEYS SSDKTFLDFS DTEFEEIGSF GLRKFPSVEI DWDAISKLAN S

Arabidopsis Description

ERF056Ethylene-responsive transcription factor ERF056 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIE4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.