Factsheet for Zm00001d020267_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35507	Sorghum	nucleus	89.86	87.5
TraesCS5D01G200900.2	Wheat	nucleus	72.64	75.7
HORVU5Hr1G058270.1	Barley	nucleus	72.3	75.62
TraesCS5B01G193200.1	Wheat	nucleus	72.3	75.35
HORVU6Hr1G060220.1	Barley	nucleus	54.05	64.78
Zm00001d032295_P001	Maize	nucleus	54.73	61.83
Zm00001d048208_P001	Maize	nucleus	44.26	44.11
GSMUA_Achr9P12950_001	Banana	nucleus	49.66	43.36
Zm00001d052229_P001	Maize	nucleus	45.95	43.04
Zm00001d030513_P001	Maize	mitochondrion	37.84	40.73
Zm00001d028017_P001	Maize	nucleus	41.22	40.67
Zm00001d018081_P001	Maize	nucleus	45.27	39.3
Zm00001d044857_P001	Maize	nucleus	44.59	37.82
Bra040381.1-P	Field mustard	nucleus	38.51	35.51
CDX73367	Canola	nucleus	38.51	35.51
CDY48227	Canola	nucleus	38.51	35.51
AT1G36060.1	Thale cress	nucleus	37.5	35.35
Zm00001d052026_P001	Maize	mitochondrion	17.91	34.42
Zm00001d035835_P001	Maize	mitochondrion	18.58	31.79
Zm00001d045120_P001	Maize	mitochondrion	17.57	30.77
Zm00001d026486_P001	Maize	mitochondrion	16.22	27.91
Zm00001d009622_P001	Maize	plastid	23.31	26.24
Zm00001d039077_P001	Maize	plastid	23.99	24.74
Zm00001d015759_P001	Maize	nucleus	16.89	23.47
Zm00001d046501_P001	Maize	nucleus	16.89	23.04
Zm00001d002011_P001	Maize	mitochondrion, nucleus	12.84	22.35
Zm00001d036889_P001	Maize	nucleus	16.89	21.74
Zm00001d051239_P001	Maize	nucleus	28.72	19.1
Zm00001d017366_P001	Maize	nucleus	28.38	18.71
Zm00001d025910_P001	Maize	nucleus	25.34	18.56
Zm00001d002867_P001	Maize	nucleus	27.03	17.7

Protein Annotations

EntrezGene:103632654	MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A060D1F1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EMBL:KJ727836	ProteinID:ONM54632.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF16	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000189CF7B	EnsemblPlantsGene:Zm00001d020267
EnsemblPlants:Zm00001d020267_P001	EnsemblPlants:Zm00001d020267_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 109Ethylene-responsive transcription factor ERF056

Coordinates

chr7:+:103377384..103378274

Molecular Weight (calculated)

31451.5 Da

IEP (calculated)

7.579

GRAVY (calculated)

-0.448

Length

296 amino acids

Sequence
(BLAST)

001: MAATIDLSGE ELMRALEPFI RDASAHGSSP LLHPHQPLSP SSPFSFHQAV AAASSYGGNY PFAAADEAGQ LSPSQMQYIQ ARLHLQRRQA QTSVLGPRAQ
101: PMKASASAAP APARPQKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA KLQSLCQSIA
201: ASKKGAKKPA SAAAAASSSA PTSNCSSPSS DDATSSCLES ATESSCPSPS PSASPGPTVP EMQQLDFSEA PWDEAAGFAL TKYPSYEIDW DSLLAN

Best Arabidopsis Sequence Match ( AT4G39780.1 )
(BLAST)

001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES

Arabidopsis Description

ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.