Factsheet for Zm00001d028017_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048208_P001	Maize	nucleus	83.67	84.51
EER92713	Sorghum	nucleus	87.67	82.97
Os03t0191900-01	Rice	nucleus	68.67	69.36
TraesCS4A01G035400.2	Wheat	nucleus	64.0	68.33
TraesCS4B01G268100.1	Wheat	nucleus	59.0	67.05
TraesCS4D01G267500.1	Wheat	nucleus	62.33	66.55
HORVU4Hr1G071890.3	Barley	nucleus	47.33	51.45
Zm00001d030513_P001	Maize	mitochondrion	45.0	49.09
Zm00001d032295_P001	Maize	nucleus	39.0	44.66
GSMUA_Achr3P04360_001	Banana	nucleus	35.33	42.4
Zm00001d052229_P001	Maize	nucleus	44.0	41.77
Zm00001d020267_P001	Maize	nucleus	40.67	41.22
Zm00001d018081_P001	Maize	nucleus	45.0	39.59
Zm00001d044857_P001	Maize	nucleus	43.33	37.25
AT1G36060.1	Thale cress	nucleus	38.0	36.31
CDX73367	Canola	nucleus	37.67	35.2
Bra040381.1-P	Field mustard	nucleus	37.0	34.58
CDY48227	Canola	nucleus	37.0	34.58
Zm00001d052026_P001	Maize	mitochondrion	17.33	33.77
Zm00001d045120_P001	Maize	mitochondrion	18.0	31.95
Zm00001d035835_P001	Maize	mitochondrion	18.0	31.21
Zm00001d026486_P001	Maize	mitochondrion	16.33	28.49
Zm00001d009622_P001	Maize	plastid	23.33	26.62
Zm00001d039077_P001	Maize	plastid	24.67	25.78
Zm00001d015759_P001	Maize	nucleus	17.0	23.94
Zm00001d046501_P001	Maize	nucleus	16.67	23.04
Zm00001d036889_P001	Maize	nucleus	17.33	22.61
Zm00001d002011_P001	Maize	mitochondrion, nucleus	12.33	21.76
Zm00001d051239_P001	Maize	nucleus	27.67	18.65
Zm00001d017366_P001	Maize	nucleus	27.33	18.26
Zm00001d025910_P001	Maize	nucleus	23.33	17.33
Zm00001d002867_P001	Maize	nucleus	26.0	17.26

Protein Annotations

EntrezGene:100216971	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:B4FKR7
EMBL:BT037705	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EMBL:KJ728229	ProteinID:ONL94480.1	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00017B69FF
EnsemblPlantsGene:Zm00001d028017	EnsemblPlants:Zm00001d028017_P001	EnsemblPlants:Zm00001d028017_T001	SEG:seg	:	:

Description

AP2-EREBP-transcription factor 101Ethylene-responsive transcription factor ERF055

Coordinates

chr1:-:20410911..20411813

Molecular Weight (calculated)

31912.5 Da

IEP (calculated)

7.766

GRAVY (calculated)

-0.250

Length

300 amino acids

Sequence
(BLAST)

001: MAATTIDWHA RNNAALPAAM YGVAVPDSKE LVRALAPPTQ QAPTISFAYP RSGVEQQSAA GSFLGAGGSG LTPAQILQVQ SRLQFLRRPA GAAVATQPMK
101: RQGVPLPQAP AVSKLYRGVR QRHWGKWVAE IRLPRNRTRL WLGTFDTAEE AALAYDSAAF RLRGDSARLN FPELRRGGQH LGPPLHAAVD AKLHAICNGT
201: DVVVPLPQSR SNDATAAATA TTAPSPFSSA SPHVKSEPGS SGSDSSFSAD GDVSSTGSSD VVLDMQLLDF SEAPWDDSES FGLRKYPSLE IDWDSILLIS

Best Arabidopsis Sequence Match ( AT4G39780.1 )
(BLAST)

001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES

Arabidopsis Description

ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.