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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g068360.2.1 Tomato mitochondrion, nucleus 92.31 92.82
PGSC0003DMT400036817 Potato mitochondrion, nucleus 62.64 71.7
PGSC0003DMT400036634 Potato mitochondrion, nucleus 62.64 71.7
PGSC0003DMT400067218 Potato mitochondrion 56.04 52.04
PGSC0003DMT400039593 Potato nucleus 15.93 40.28
PGSC0003DMT400007494 Potato nucleus 38.46 34.65
PGSC0003DMT400077702 Potato nucleus 37.91 34.16
PGSC0003DMT400001703 Potato nucleus 38.46 33.98
PGSC0003DMT400080372 Potato nucleus 24.73 17.44
PGSC0003DMT400022023 Potato nucleus 29.67 15.93
PGSC0003DMT400031685 Potato nucleus 24.73 15.31
PGSC0003DMT400014953 Potato nucleus 24.18 14.1
PGSC0003DMT400024508 Potato nucleus 28.02 13.9
PGSC0003DMT400053152 Potato nucleus 28.02 13.78
PGSC0003DMT400091991 Potato nucleus 24.18 12.94
PGSC0003DMT400039576 Potato nucleus 23.63 12.18
PGSC0003DMT400047265 Potato nucleus 23.63 11.05
Protein Annotations
EntrezGene:102603982MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471
InterPro:IPR036955UniProt:M1CRU8PFAM:PF00847EnsemblPlantsGene:PGSC0003DMG400028500PGSC:PGSC0003DMG400028500EnsemblPlants:PGSC0003DMT400073334
PIRSF:PIRSF038123PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31194PANTHER:PTHR31194:SF4SMART:SM00380
SUPFAM:SSF54171UniParc:UPI000294CDDERefSeq:XP_006356236.1SEG:seg::
Description
Protein PPLZ02 [Source:PGSC_GENE;Acc:PGSC0003DMG400028500]
Coordinates
chr6:-:49940521..49941523
Molecular Weight (calculated)
20850.6 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.709
Length
182 amino acids
Sequence
(BLAST)
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFAFNDSDS HSSSSTKYLS AALIAKLQRC QMKSLNMVNN
101: RPGTMKLEDE NNQLSSCHQL GNRGDHGIAR RNVQMSVEMP VSYESQAEST QQFKSLEDHQ IEQMIEELLD YGSIELCSVL QE
Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)
001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
Arabidopsis Description
ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.