Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039593 | Potato | nucleus | 16.67 | 59.72 |
| Solyc09g091950.1.1 | Tomato | extracellular, nucleus | 94.96 | 58.47 |
| VIT_05s0029g00140.t01 | Wine grape | nucleus | 55.04 | 35.15 |
| CDY53558 | Canola | nucleus | 43.02 | 31.81 |
| Bra032724.1-P | Field mustard | nucleus | 42.64 | 31.43 |
| GSMUA_Achr8P28500_001 | Banana | nucleus | 33.72 | 31.3 |
| KRH34596 | Soybean | nucleus | 43.41 | 28.94 |
| AT4G13620.1 | Thale cress | nucleus | 43.02 | 28.61 |
| KRG92191 | Soybean | nucleus | 42.64 | 26.96 |
| PGSC0003DMT400007494 | Potato | nucleus | 20.54 | 26.24 |
| PGSC0003DMT400036817 | Potato | mitochondrion, nucleus | 15.89 | 25.79 |
| PGSC0003DMT400036634 | Potato | mitochondrion, nucleus | 15.89 | 25.79 |
| PGSC0003DMT400001703 | Potato | nucleus | 20.16 | 25.24 |
| PGSC0003DMT400073334 | Potato | mitochondrion | 17.44 | 24.73 |
| PGSC0003DMT400067218 | Potato | mitochondrion | 18.22 | 23.98 |
| PGSC0003DMT400031685 | Potato | nucleus | 26.36 | 23.13 |
| PGSC0003DMT400077702 | Potato | nucleus | 17.83 | 22.77 |
| PGSC0003DMT400053152 | Potato | nucleus | 32.17 | 22.43 |
| PGSC0003DMT400024508 | Potato | nucleus | 31.01 | 21.8 |
| PGSC0003DMT400014953 | Potato | nucleus | 26.36 | 21.79 |
| PGSC0003DMT400022023 | Potato | nucleus | 28.29 | 21.53 |
| PGSC0003DMT400047265 | Potato | nucleus | 23.64 | 15.68 |
| PGSC0003DMT400091991 | Potato | nucleus | 20.54 | 15.59 |
| PGSC0003DMT400039576 | Potato | nucleus | 20.93 | 15.3 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M1D3E8 |
| PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400031294 | PGSC:PGSC0003DMG400031294 | EnsemblPlants:PGSC0003DMT400080372 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31657 | PANTHER:PTHR31657:SF23 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000294DF2B | SEG:seg |
Description
AP2/ERF domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400031294]
Coordinates
chr9:+:58938568..58939532
Molecular Weight (calculated)
29026.2 Da
IEP (calculated)
9.536
GRAVY (calculated)
-0.638
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSIGHESQ IHYQEAATTN PTNWLKMNQT ITNCTTTKGF SDYWLSTTKT QPMKFKGSSR KSSLIHYENS PSSSSSSPSS MTASQGKLFR GVRQRHWGKW
101: VAEIRLPRNR TRVWLGTFDT AEEAAFAYDT AAYMLRGDYA HLNFPHLKNQ LKANSINGNI TSLLEAKIRA ISAQSKKANN ISDRDENIIS PKGLSDDNAT
201: IKNTIIQNQE KEINCEKLME ITKVKNINQE NVDGVQLSRM PSLDMDMIWD ALLVSDLS
101: VAEIRLPRNR TRVWLGTFDT AEEAAFAYDT AAYMLRGDYA HLNFPHLKNQ LKANSINGNI TSLLEAKIRA ISAQSKKANN ISDRDENIIS PKGLSDDNAT
201: IKNTIIQNQE KEINCEKLME ITKVKNINQE NVDGVQLSRM PSLDMDMIWD ALLVSDLS
001: MITPIHTQHS LILVYINIYS PPILSKLRTG FILWTNTQKT NKKRNMEDQF PKIETSFMHD KLLSSGIYGF LSSSTPPQLL GVPIFLEGMK SPLLPASSTP
101: SYFVSPHDHE LTSSIHPSPV ASVPWNFLES FPQSQHPDHH PSKPPNLTLF LKEPKLLELS QSESNMSPYH KYIPNSFYQS DQNRNEWVEI NKTLTNYPSK
201: GFGNYWLSTT KTQPMKSKTR KVVQTTTPTK LYRGVRQRHW GKWVAEIRLP RNRTRVWLGT FETAEQAAMA YDTAAYILRG EFAHLNFPDL KHQLKSGSLR
301: CMIASLLESK IQQISSSQVS NSPSPPPPKV GTPEQKNHHM KMESGEDVMM KKQKSHKEVM EGDGVQLSRM PSLDMDLIWD ALSFPHSS
101: SYFVSPHDHE LTSSIHPSPV ASVPWNFLES FPQSQHPDHH PSKPPNLTLF LKEPKLLELS QSESNMSPYH KYIPNSFYQS DQNRNEWVEI NKTLTNYPSK
201: GFGNYWLSTT KTQPMKSKTR KVVQTTTPTK LYRGVRQRHW GKWVAEIRLP RNRTRVWLGT FETAEQAAMA YDTAAYILRG EFAHLNFPDL KHQLKSGSLR
301: CMIASLLESK IQQISSSQVS NSPSPPPPKV GTPEQKNHHM KMESGEDVMM KKQKSHKEVM EGDGVQLSRM PSLDMDLIWD ALSFPHSS
Arabidopsis Description
ERF062Ethylene-responsive transcription factor ERF062 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.