Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0702700-01 | Rice | nucleus | 15.34 | 15.95 |
| Os05t0543600-01 | Rice | nucleus | 15.02 | 15.06 |
| Os04t0532800-01 | Rice | nucleus | 12.78 | 14.65 |
| Os05t0140100-01 | Rice | nucleus | 17.25 | 12.65 |
| Os01t0285300-01 | Rice | nucleus | 16.29 | 11.92 |
| Os01t0709000-01 | Rice | nucleus | 11.18 | 11.4 |
| Os08t0151300-01 | Rice | nucleus | 12.78 | 11.14 |
| Os03t0371800-00 | Rice | nucleus | 13.1 | 10.3 |
| Os07t0634900-00 | Rice | plastid | 11.82 | 10.25 |
| Os07t0497500-00 | Rice | nucleus | 12.78 | 10.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.2 | UniProt:A0A0P0YAP8 | ProteinID:BAT17367.1 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os12g0515300 | EnsemblPlants:Os12t0515300-00 | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF577 | InterPro:SANT/Myb | SUPFAM:SSF46689 | UniParc:UPI000393B0F8 |
| SEG:seg | : | : | : | : | : |
Description
MYB transcription factor 46Homeodomain-like domain containing protein. (Os12t0515300-00)
Coordinates
chr12:-:19991426..19992367
Molecular Weight (calculated)
33913.0 Da
IEP (calculated)
6.214
GRAVY (calculated)
-0.584
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLPYYDAW NYCRWSQIAA RLPGRTDNEI KNFWNSTIKK RLKISSSSAS PATTTDCASP PEHKLGAVVD LAGGGGATDD VVVGTANAAM KSMWVDSSSS
101: SSSSSSSMQS RPSIMAAAAA GRSYGGLLPL PDQVCGVDTS PPPPFFHDHS ISIKQAYYGS TGAHHHHHAI ATMDGSSLIG DHHHHSSSIL FGGASVPPLL
201: DHQTILDDDD DHPNKTGSNT TAATLSSNIT DNSNSNKNNS DNNNNISSSC CISLMNSSSN MIYWEGHHQQ QQQQHQMLQQ QQQHMSRNVM GEWDLEELMK
301: DVSSLPFLDF QVE
101: SSSSSSSMQS RPSIMAAAAA GRSYGGLLPL PDQVCGVDTS PPPPFFHDHS ISIKQAYYGS TGAHHHHHAI ATMDGSSLIG DHHHHSSSIL FGGASVPPLL
201: DHQTILDDDD DHPNKTGSNT TAATLSSNIT DNSNSNKNNS DNNNNISSSC CISLMNSSSN MIYWEGHHQQ QQQQHQMLQQ QQQHMSRNVM GEWDLEELMK
301: DVSSLPFLDF QVE
001: MRKPEVAIAA STHQVKKMKK GLWSPEEDSK LMQYMLSNGQ GCWSDVAKNA GLQRCGKSCR LRWINYLRPD LKRGAFSPQE EDLIIRFHSI LGNRWSQIAA
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
Arabidopsis Description
MYB46Transcription factor MYB46 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.