Factsheet for Os03t0371800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G244200.1	Wheat	nucleus	53.52	73.45
TraesCS7D01G340300.1	Wheat	nucleus	52.51	72.82
EER92216	Sorghum	nucleus	55.28	66.67
HORVU7Hr1G082020.1	Barley	nucleus	53.52	60.86
Os01t0702700-01	Rice	nucleus	29.9	39.53
Os05t0543600-01	Rice	nucleus	30.4	38.78
Os07t0634900-00	Rice	plastid	32.91	36.29
Os04t0532800-01	Rice	nucleus	22.61	32.97
Os01t0709000-01	Rice	nucleus	25.38	32.9
Os05t0140100-01	Rice	nucleus	35.18	32.79
Os01t0285300-01	Rice	nucleus	35.18	32.71
Os07t0497500-00	Rice	nucleus	27.39	27.25
Os08t0151300-01	Rice	nucleus	22.61	25.07
Os12t0515300-00	Rice	nucleus	10.3	13.1

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	ProteinID:ABF96185.1	ProteinID:BAS84371.1	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os03g0371800	EnsemblPlants:Os03t0371800-00	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF601	UniProt:Q10KS8	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0000DB4A19	SEG:seg	:	:	:

Description

Similar to Myb-like DNA-binding domain containing protein. (Os03t0371800-00)

Coordinates

chr3:-:14598168..14599574

Molecular Weight (calculated)

42131.4 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.203

Length

398 amino acids

Sequence
(BLAST)

001: MAKQSCCHKK KLRRGLWSPE EDEKLMNHIA KYGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGTF SQEEEDLIIQ LHSMLGNKYV LYSSSTHICQ
101: SLSRSVPSLT MAAATATALA RWSQIAAQLP GRTDNEVKNF WNSYIKKKLR DRGIDPATHK PLAADSSATP TNTTAAAASR STATCRAVFS DAELQIPTAA
201: AVQQQQQAPL VGAMQLVDGI KMPLDDYWPA AAAAAAPSSS TTTFSAYHHA LSMQQQAAAG CGAAAAFDMD ALSHCGVVVA PSASSSSTLT SMAGLSPAAA
301: DAAEQSANVA AAAAATTTNL PWLDLGHANP IATMDHYAGV LDELRWSDYF DGAYQAATTA TQGGALQGQC LYDGGGGGGK DVDDAVQFVD VHSLSNWC

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.