Factsheet for TraesCS7D01G340300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G244200.1	Wheat	nucleus	95.12	94.14
HORVU7Hr1G082020.1	Barley	nucleus	91.99	75.43
EER92216	Sorghum	nucleus	70.38	61.21
Os03t0371800-00	Rice	nucleus	72.82	52.51
TraesCS2D01G158200.1	Wheat	nucleus	59.58	49.0
TraesCS2D01G158300.1	Wheat	nucleus	44.25	44.56
TraesCS4D01G309700.1	Wheat	nucleus	33.8	44.09
TraesCS3D01G255400.1	Wheat	nucleus	39.02	39.3
TraesCS1D01G371800.1	Wheat	nucleus	39.02	38.62
TraesCS1D01G371900.1	Wheat	nucleus	36.59	37.37
TraesCS1D01G371700.1	Wheat	nucleus	37.98	37.2
TraesCS1D01G371400.1	Wheat	nucleus	38.33	36.3
TraesCS1D01G371500.1	Wheat	nucleus	37.28	35.91
TraesCS2D01G366800.1	Wheat	nucleus	31.71	32.97
TraesCS3D01G251600.1	Wheat	nucleus	33.45	32.76
TraesCS2D01G366900.1	Wheat	nucleus	32.06	32.51
TraesCS2D01G367000.1	Wheat	nucleus	31.01	31.67
TraesCS1D01G084400.1	Wheat	nucleus	45.3	30.3
TraesCS6D01G219300.1	Wheat	nucleus	30.31	29.49
TraesCS3D01G094500.1	Wheat	nucleus	26.48	26.67
TraesCS6D01G043600.1	Wheat	nucleus	29.27	26.58
TraesCS2D01G234000.1	Wheat	nucleus	35.19	26.44
TraesCS7D01G300000.1	Wheat	nucleus	31.01	25.95
TraesCS5D01G113300.1	Wheat	nucleus	29.27	21.59

Protein Annotations

EnsemblPlants:TraesCS7D01G340300.1	EnsemblPlantsGene:TraesCS7D01G340300	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS51294	SMART:SM00717	SUPFAM:SSF46689	TIGR:cd00167
MapMan:15.5.2.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:436113964..436114998

Molecular Weight (calculated)

31917.9 Da

IEP (calculated)

6.033

GRAVY (calculated)

-0.399

Length

287 amino acids

Sequence
(BLAST)

001: MAKQSCCYKK RLRRGLWSPE EDEKLMNHIA MYGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGTF SQEEEDLIIH LHSMIGNKWS QIAAQLPGRT
101: DNEVKNFWNS YIKKKLRERG IDPATHKPLA EATTSPTACR PVFSDAELVP TMTAALAQDQ VVKMLDSLKM PLDWPVGGVA GNGVPESYQV PILQEGHMLQ
201: QHCGTFPSVS SSSTLTATDV GTTLPWLELG PTDTISGHVD QYAGALGELR WSDYFDGALQ GQCVYDSGMV DDDAVQFDDV HGLSNWC

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.