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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G094300.1 Wheat nucleus 91.23 93.53
TraesCS3B01G109800.1 Wheat nucleus 92.28 92.61
HORVU3Hr1G016940.1 Barley nucleus 89.47 89.16
OQU86237 Sorghum nucleus 56.49 59.85
Zm00001d008695_P001 Maize nucleus 55.09 56.68
TraesCS1D01G371700.1 Wheat nucleus 30.88 30.03
TraesCS1D01G371800.1 Wheat nucleus 30.53 30.0
TraesCS1D01G371900.1 Wheat nucleus 29.47 29.89
TraesCS1D01G371500.1 Wheat nucleus 30.18 28.86
TraesCS4D01G309700.1 Wheat nucleus 22.11 28.64
TraesCS3D01G255400.1 Wheat nucleus 28.42 28.42
TraesCS1D01G371400.1 Wheat nucleus 29.47 27.72
TraesCS2D01G366800.1 Wheat nucleus 25.96 26.81
TraesCS2D01G366900.1 Wheat nucleus 26.32 26.5
TraesCS7D01G340300.1 Wheat nucleus 26.67 26.48
TraesCS2D01G367000.1 Wheat nucleus 25.61 25.98
TraesCS2D01G158300.1 Wheat nucleus 25.96 25.96
PGSC0003DMT400069644 Potato nucleus 28.42 25.71
Solyc06g071690.2.1 Tomato nucleus 28.77 25.55
TraesCS3D01G251600.1 Wheat nucleus 25.96 25.26
TraesCS6D01G219300.1 Wheat nucleus 25.96 25.08
TraesCS6D01G043600.1 Wheat nucleus 27.02 24.37
Solyc03g112390.2.1 Tomato nucleus 27.37 24.0
PGSC0003DMT400046645 Potato nucleus 27.37 24.0
TraesCS2D01G158200.1 Wheat nucleus 28.77 23.5
KRH63612 Soybean nucleus 29.47 23.4
VIT_17s0000g09080.t01 Wine grape nucleus 29.47 23.14
TraesCS7D01G300000.1 Wheat nucleus 27.72 23.03
KRH54334 Soybean nucleus 28.77 22.53
KRH57123 Soybean nucleus 29.12 22.43
KRH03235 Soybean nucleus 28.07 22.1
TraesCS5D01G113300.1 Wheat nucleus 27.02 19.79
TraesCS1D01G084400.1 Wheat nucleus 28.07 18.65
TraesCS2D01G234000.1 Wheat nucleus 24.56 18.32
Protein Annotations
EnsemblPlants:TraesCS3D01G094500.1EnsemblPlantsGene:TraesCS3D01G094500Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/MybPANTHER:PTHR10641
PANTHER:PTHR10641:SF661PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717SUPFAM:SSF46689
TIGR:cd00167MapMan:15.5.2.1::::
Description
No Description!
Coordinates
chr3D:+:48070609..48071676
Molecular Weight (calculated)
30446.5 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.608
Length
285 amino acids
Sequence
(BLAST)
001: MVEKPASQAD VGGEVEAHKE RKGLWSPEED ERLYTRITRH GVSTWSSVAQ LAGLRRSGKS CRLRWMNYLR PDLKKEPISK REEETIISLQ KSLGNRWSVI
101: AAKMPGRTDN EIKNYWNSRI RKRQTISTGG GKGDSGLAKQ QGDLPAADDK ASVLAPPGEK ELVSSMATGA AAPPVPARFP LFACQLLGGG GGGGGDAAIA
201: AAGTTESTTT HENNGAGSES DVSVGNGGGQ DGREGHYYYC AVDGDIDMVH LMSFDDLLEY PAGDLLMDAW DQNGLYSTNT GNSVD
Best Arabidopsis Sequence Match ( AT5G26660.1 )
(BLAST)
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Arabidopsis Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.