Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069644 | Potato | nucleus | 54.55 | 62.86 |
| PGSC0003DMT400046645 | Potato | nucleus | 54.55 | 60.92 |
| Solyc03g112390.2.1 | Tomato | nucleus | 53.44 | 59.69 |
| Solyc06g071690.2.1 | Tomato | nucleus | 52.34 | 59.19 |
| KRH57123 | Soybean | nucleus | 60.06 | 58.92 |
| KRH63612 | Soybean | nucleus | 57.85 | 58.5 |
| KRH54334 | Soybean | nucleus | 57.85 | 57.69 |
| KRH03235 | Soybean | nucleus | 56.47 | 56.63 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 35.81 | 46.26 |
| TraesCS3D01G255400.1 | Wheat | nucleus | 36.09 | 45.96 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 38.29 | 45.28 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 36.36 | 45.05 |
| TraesCS1D01G371900.1 | Wheat | nucleus | 34.71 | 44.84 |
| TraesCS1D01G371700.1 | Wheat | nucleus | 35.81 | 44.37 |
| Os01t0702700-01 | Rice | nucleus | 36.64 | 44.19 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 34.99 | 43.94 |
| Zm00001d009435_P001 | Maize | nucleus | 30.58 | 43.87 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 35.26 | 43.84 |
| TraesCS1D01G371800.1 | Wheat | nucleus | 34.99 | 43.79 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 34.71 | 43.75 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 35.26 | 43.1 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 34.16 | 42.91 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 34.99 | 42.91 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 37.19 | 42.86 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 35.81 | 42.62 |
| TraesCS1D01G371400.1 | Wheat | nucleus | 35.54 | 42.57 |
| EES03490 | Sorghum | nucleus | 36.36 | 42.04 |
| TraesCS1D01G371500.1 | Wheat | nucleus | 34.44 | 41.95 |
| EES18602 | Sorghum | nucleus | 37.19 | 41.93 |
| Zm00001d038878_P001 | Maize | nucleus | 37.19 | 41.93 |
| Os05t0543600-01 | Rice | nucleus | 35.81 | 41.67 |
| VIT_05s0020g01100.t01 | Wine grape | nucleus | 33.88 | 41.41 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 34.71 | 41.18 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 35.81 | 41.14 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 31.68 | 41.07 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 33.33 | 40.07 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 33.33 | 39.03 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 32.23 | 38.61 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 32.23 | 38.36 |
| Zm00001d043729_P001 | Maize | nucleus | 23.42 | 37.12 |
| Zm00001d011669_P001 | Maize | nucleus | 24.52 | 37.08 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 31.41 | 36.77 |
| EES03100 | Sorghum | nucleus | 34.16 | 36.36 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 34.16 | 35.23 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 41.6 | 34.4 |
| VIT_09s0002g01670.t01 | Wine grape | nucleus | 29.2 | 34.3 |
| EES02393 | Sorghum | nucleus | 26.45 | 34.29 |
| VIT_07s0005g02480.t01 | Wine grape | nucleus | 41.87 | 33.7 |
| EES07893 | Sorghum | nucleus | 23.42 | 33.6 |
| VIT_01s0010g00410.t01 | Wine grape | nucleus | 31.13 | 32.75 |
| VIT_02s0025g00320.t01 | Wine grape | nucleus | 27.27 | 32.57 |
| VIT_19s0085g00940.t01 | Wine grape | nucleus | 29.75 | 32.05 |
| Zm00001d005055_P001 | Maize | nucleus | 19.83 | 31.72 |
| Zm00001d039700_P001 | Maize | nucleus | 20.66 | 31.38 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 25.34 | 30.87 |
| OQU86237 | Sorghum | nucleus | 22.86 | 30.86 |
| TraesCS3A01G094300.1 | Wheat | nucleus | 23.42 | 30.58 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 23.69 | 30.07 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 23.42 | 29.93 |
| VIT_06s0004g02110.t01 | Wine grape | nucleus | 26.72 | 29.85 |
| Zm00001d008695_P001 | Maize | nucleus | 22.59 | 29.6 |
| TraesCS3D01G094500.1 | Wheat | nucleus | 23.14 | 29.47 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 22.86 | 28.72 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 24.24 | 18.57 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100241618 | wikigene:100241618 | MapMan:15.5.2.1 | ProteinID:CCB42947 | ProteinID:CCB42947.1 |
| UniProt:F6GSI2 | EMBL:FN594950 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EntrezGene:LOC100241618 | wikigene:LOC100241618 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF466 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002108094 | ArrayExpress:VIT_17s0000g09080 |
| EnsemblPlantsGene:VIT_17s0000g09080 | EnsemblPlants:VIT_17s0000g09080.t01 | unigene:Vvi.15113 | RefSeq:XP_002278063 | RefSeq:XP_002278063.1 | SEG:seg |
Description
No Description!
Coordinates
chr17:+:10650213..10651994
Molecular Weight (calculated)
41146.4 Da
IEP (calculated)
6.970
GRAVY (calculated)
-0.584
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCLKQ KLRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGMF SQQEEDIIIS LHQVLGNRWA QIAAQLPGRT
101: DNEIKNFWNS CLKKKLLKQG MDPNTHKPLN ETEVGDGKNC TEKASLQVLQ PKGLPAVPSS AAEFEQPFMV NNSSCYDGGL TEGSRVQFMN KPGFDPMSFF
201: EFQAGVDPMG YSSNLLSQYH QTIRPFDQNQ LEANSNVGFA SLPGLTNFDQ GNLTETDFSD NSASRMGSFF FNEAKESSSN SSNITSHPAG FQINNMGENV
301: AFSWDAENKL EALFQYQISG IKSEELKPSS WYGDQLQHHF HCCHFPDFSY IQTRKFYPLL PFL
101: DNEIKNFWNS CLKKKLLKQG MDPNTHKPLN ETEVGDGKNC TEKASLQVLQ PKGLPAVPSS AAEFEQPFMV NNSSCYDGGL TEGSRVQFMN KPGFDPMSFF
201: EFQAGVDPMG YSSNLLSQYH QTIRPFDQNQ LEANSNVGFA SLPGLTNFDQ GNLTETDFSD NSASRMGSFF FNEAKESSSN SSNITSHPAG FQINNMGENV
301: AFSWDAENKL EALFQYQISG IKSEELKPSS WYGDQLQHHF HCCHFPDFSY IQTRKFYPLL PFL
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Arabidopsis Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.