Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g112390.2.1 | Tomato | nucleus | 95.08 | 95.08 |
| PGSC0003DMT400069644 | Potato | nucleus | 59.38 | 61.27 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 60.92 | 54.55 |
| KRH57123 | Soybean | nucleus | 56.0 | 49.19 |
| KRH63612 | Soybean | nucleus | 53.54 | 48.47 |
| KRH54334 | Soybean | nucleus | 53.54 | 47.8 |
| KRH03235 | Soybean | nucleus | 52.92 | 47.51 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 36.31 | 41.99 |
| Zm00001d009435_P001 | Maize | nucleus | 32.62 | 41.9 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 39.38 | 41.69 |
| TraesCS3D01G255400.1 | Wheat | nucleus | 36.31 | 41.4 |
| Os01t0702700-01 | Rice | nucleus | 37.23 | 40.2 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 36.0 | 40.07 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 38.77 | 40.0 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 37.23 | 39.54 |
| TraesCS1D01G371900.1 | Wheat | nucleus | 34.15 | 39.5 |
| TraesCS1D01G371800.1 | Wheat | nucleus | 35.08 | 39.31 |
| TraesCS1D01G371700.1 | Wheat | nucleus | 35.38 | 39.25 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 35.38 | 39.25 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 34.46 | 38.89 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 35.38 | 38.72 |
| PGSC0003DMT400087467 | Potato | nucleus | 32.31 | 38.18 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 34.77 | 38.18 |
| EES03490 | Sorghum | nucleus | 36.62 | 37.9 |
| EES18602 | Sorghum | nucleus | 37.54 | 37.89 |
| Os05t0543600-01 | Rice | nucleus | 36.31 | 37.82 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 35.08 | 37.75 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 33.54 | 37.72 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 35.38 | 37.7 |
| TraesCS1D01G371500.1 | Wheat | nucleus | 34.46 | 37.58 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 33.23 | 37.37 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 36.31 | 37.34 |
| TraesCS1D01G371400.1 | Wheat | nucleus | 34.46 | 36.96 |
| Zm00001d038878_P001 | Maize | nucleus | 36.62 | 36.96 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 31.69 | 36.79 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 34.15 | 36.39 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 33.85 | 36.3 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 34.46 | 36.13 |
| EES03100 | Sorghum | nucleus | 36.31 | 34.6 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 32.31 | 33.87 |
| Zm00001d043729_P001 | Maize | nucleus | 23.69 | 33.62 |
| Zm00001d011669_P001 | Maize | nucleus | 24.31 | 32.92 |
| EES02393 | Sorghum | nucleus | 28.0 | 32.5 |
| PGSC0003DMT400047076 | Potato | nucleus | 42.46 | 32.39 |
| EES07893 | Sorghum | nucleus | 24.62 | 31.62 |
| PGSC0003DMT400018897 | Potato | nucleus | 30.46 | 30.94 |
| OQU86237 | Sorghum | nucleus | 25.23 | 30.48 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 32.92 | 30.4 |
| PGSC0003DMT400040774 | Potato | nucleus | 37.85 | 30.22 |
| Zm00001d005055_P001 | Maize | nucleus | 20.92 | 29.96 |
| PGSC0003DMT400037080 | Potato | nucleus | 25.23 | 29.5 |
| Zm00001d039700_P001 | Maize | nucleus | 21.54 | 29.29 |
| Zm00001d008695_P001 | Maize | nucleus | 24.62 | 28.88 |
| TraesCS3A01G094300.1 | Wheat | nucleus | 23.69 | 27.7 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 24.0 | 27.46 |
| TraesCS3D01G094500.1 | Wheat | nucleus | 24.0 | 27.37 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 24.0 | 27.27 |
| PGSC0003DMT400018995 | Potato | nucleus | 29.23 | 27.07 |
| PGSC0003DMT400017709 | Potato | nucleus | 28.92 | 26.48 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 24.62 | 16.88 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102606052 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1BJE1 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400018113 | PGSC:PGSC0003DMG400018113 | EnsemblPlants:PGSC0003DMT400046645 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF466 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00029597D3 | RefSeq:XP_006344457.1 | SEG:seg |
Description
R2r3-myb transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400018113]
Coordinates
chr3:-:52151311..52153379
Molecular Weight (calculated)
37001.1 Da
IEP (calculated)
5.708
GRAVY (calculated)
-0.830
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCSVKQ KLRKGLWSPE EDEKLCNYIT NFGIGSWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGMF SQDEEDKIIS LHQVLGNRWA QIAAQLPGRT
101: DNEIKNFWNS SLKKKLMKQG IDPNTHKPLK ENQVIKDEEN CTNKTSMLQI PPHLNEMANG QFTESKQVFD LLFVPDFQSN SNPSEYNSEV LAQYHDQQSE
201: FENNPNYVFC SASSVTKLEH GQMTETDFGS SSTSRMSSSN SSNMCSNQNT AGIQINGMSE NSEALSWDIE NKMESLFQYP YIGIKNEELK SSPSQERDQL
301: YGNSTSGDFM SNYPLSSLTE EFKWG
101: DNEIKNFWNS SLKKKLMKQG IDPNTHKPLK ENQVIKDEEN CTNKTSMLQI PPHLNEMANG QFTESKQVFD LLFVPDFQSN SNPSEYNSEV LAQYHDQQSE
201: FENNPNYVFC SASSVTKLEH GQMTETDFGS SSTSRMSSSN SSNMCSNQNT AGIQINGMSE NSEALSWDIE NKMESLFQYP YIGIKNEELK SSPSQERDQL
301: YGNSTSGDFM SNYPLSSLTE EFKWG
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Arabidopsis Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.