Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plasma membrane | 86.64 | 85.81 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 69.71 | 67.94 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 66.45 | 66.89 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 63.19 | 63.4 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 25.08 | 54.23 |
| GSMUA_Achr11P... | Banana | nucleus | 35.18 | 46.35 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 40.07 | 43.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.44 | 42.91 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 41.69 | 42.38 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 41.04 | 41.58 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 40.72 | 40.72 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 41.04 | 40.65 |
| Solyc03g112390.2.1 | Tomato | nucleus | 41.69 | 39.38 |
| PGSC0003DMT400046645 | Potato | nucleus | 41.69 | 39.38 |
| KRH63612 | Soybean | nucleus | 44.95 | 38.44 |
| PGSC0003DMT400069644 | Potato | nucleus | 39.41 | 38.41 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 41.69 | 38.32 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 45.28 | 38.29 |
| KRH57123 | Soybean | nucleus | 45.93 | 38.11 |
| EES03100 | Sorghum | nucleus | 42.02 | 37.83 |
| KRH54334 | Soybean | nucleus | 44.63 | 37.64 |
| KRH03235 | Soybean | nucleus | 44.3 | 37.57 |
| Solyc06g071690.2.1 | Tomato | nucleus | 39.09 | 37.38 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 41.04 | 36.73 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 42.35 | 36.11 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 40.07 | 35.76 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 43.0 | 35.68 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 41.37 | 35.28 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 41.69 | 35.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.92 | 34.63 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 42.67 | 34.38 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 41.69 | 34.13 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 32.9 | 33.78 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 30.29 | 33.33 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 33.55 | 33.12 |
| GSMUA_Achr10P... | Banana | nucleus | 31.92 | 33.0 |
| GSMUA_Achr11P... | Banana | nucleus | 40.07 | 32.8 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 30.94 | 31.99 |
| GSMUA_Achr8P03510_001 | Banana | nucleus | 32.57 | 31.35 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 25.08 | 31.3 |
| GSMUA_Achr9P11190_001 | Banana | nucleus | 33.22 | 31.19 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 27.69 | 30.58 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 26.38 | 29.03 |
| GSMUA_Achr9P25110_001 | Banana | nucleus | 29.64 | 28.89 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 25.73 | 27.24 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 24.1 | 27.11 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 26.06 | 25.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr3G28540_001 | EnsemblPlants:GSMUA_Achr3P28540_001 | EnsemblPlants:GSMUA_Achr3T28540_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0SIM0 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF466 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294C968 | : | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G28540_001]
Coordinates
chr3:+:27792238..27793298
Molecular Weight (calculated)
35141.4 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.563
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCLRQ KLRKGLWSPE EDEKLYNHII AFGVGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGSF SQQEEDVIIG LHGILGNRWS KIASQLPGRT
101: DNEIKNFWNS CLKKKLRLRG IDPTTHRPLN EVKTQEETIR MYYSNSGANF EQLPEHPFPL IEIQTCLDSI ESNANFYYQF HQPFEPLSQN ECLVKPELCD
201: YGGVMDVPEN FGYGESSSNS GNWNCNVVPE IKHVFGSEAL NWVSVSKAET LVEPHEHKHS SWRECQHVMS SEDFSTEPVG SLPRDLSDIC FNVPRDASVG
301: EFNVEFI
101: DNEIKNFWNS CLKKKLRLRG IDPTTHRPLN EVKTQEETIR MYYSNSGANF EQLPEHPFPL IEIQTCLDSI ESNANFYYQF HQPFEPLSQN ECLVKPELCD
201: YGGVMDVPEN FGYGESSSNS GNWNCNVVPE IKHVFGSEAL NWVSVSKAET LVEPHEHKHS SWRECQHVMS SEDFSTEPVG SLPRDLSDIC FNVPRDASVG
301: EFNVEFI
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.