Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 51.77 | 54.21 |
| VIT_02s0025g00320.t01 | Wine grape | nucleus | 52.41 | 53.62 |
| KRH77586 | Soybean | nucleus | 54.34 | 51.84 |
| KRH41236 | Soybean | nucleus | 52.73 | 51.09 |
| KRH27893 | Soybean | nucleus | 53.38 | 51.08 |
| KRH59965 | Soybean | nucleus | 51.77 | 50.31 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 22.19 | 48.59 |
| Solyc08g081500.1.1 | Tomato | nucleus | 49.2 | 46.22 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 46.62 | 42.52 |
| Os08t0151300-01 | Rice | nucleus | 48.87 | 42.34 |
| EES13346 | Sorghum | nucleus | 47.91 | 42.21 |
| TraesCS7B01G204800.1 | Wheat | nucleus | 46.62 | 42.03 |
| TraesCS7A01G304500.1 | Wheat | nucleus | 46.3 | 41.98 |
| TraesCS7D01G300000.1 | Wheat | nucleus | 46.3 | 41.98 |
| CDY38211 | Canola | nucleus | 49.52 | 41.73 |
| CDY08343 | Canola | nucleus | 49.52 | 41.73 |
| Zm00001d024630_P002 | Maize | nucleus | 47.59 | 40.88 |
| AT1G63910.1 | Thale cress | nucleus | 48.55 | 40.81 |
| Bra027771.1-P | Field mustard | nucleus | 47.91 | 40.71 |
| Bra027668.1-P | Field mustard | nucleus | 47.91 | 40.38 |
| CDY25547 | Canola | nucleus | 47.27 | 39.73 |
| GSMUA_Achr11P... | Banana | nucleus | 27.33 | 36.48 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 32.48 | 35.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.51 | 35.64 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 33.12 | 33.55 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 31.83 | 32.25 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 32.15 | 31.75 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 24.44 | 30.89 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 27.65 | 30.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.97 | 30.74 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 32.8 | 30.54 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 29.26 | 30.43 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 29.9 | 30.39 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 28.94 | 30.3 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 26.69 | 29.86 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 32.8 | 29.74 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 28.94 | 29.51 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 26.37 | 29.39 |
| GSMUA_Achr9P11190_001 | Banana | nucleus | 30.87 | 29.36 |
| GSMUA_Achr9P25110_001 | Banana | nucleus | 28.94 | 28.57 |
| GSMUA_Achr8P03510_001 | Banana | nucleus | 28.94 | 28.21 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 31.19 | 28.2 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 24.44 | 27.84 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 32.15 | 27.78 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 32.15 | 27.78 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 33.44 | 27.3 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 31.83 | 27.12 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 32.15 | 27.03 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 26.69 | 26.77 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 23.79 | 25.52 |
| GSMUA_Achr11P... | Banana | nucleus | 30.55 | 25.33 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 24.44 | 24.68 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 29.58 | 24.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P36930_001 | EnsemblPlants:GSMUA_Achr6T36930_001 | EnsemblPlantsGene:GSMUA_Achr6G36930_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF451 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000295100D | UniProt:M0TDD3 | MapMan:15.5.2.1 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G36930_001]
Coordinates
chr6:-:34805383..34806554
Molecular Weight (calculated)
35256.5 Da
IEP (calculated)
5.584
GRAVY (calculated)
-0.653
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNQQ KVRRGLWSPE EDEKLIRYIT AHGYCCWSEV PMKAGLQRCG KSCRLRWINY LRPGIRRGRI TPEEEKLIIS LHGIVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPT TPQPTASPRV ELVHPSLNSM NQLDSTDLHR DLTSKSSPDP IFPSPWPLFM FDDGGVSGRH SASSCTREEP LQEATCSDMY
201: NVPNHKQDEA DMPSLFDLVN SSMTYNNLPP LVDDMENTVT EEEAQPCCLG DNGEVSGESF EKKGLGEWLV PQQYSCLLSW DDVQSPIGDE TIITTSSSMA
301: TMDTTFPFPW Q
101: DNEIKNYWNS WIKKKIRKPT TPQPTASPRV ELVHPSLNSM NQLDSTDLHR DLTSKSSPDP IFPSPWPLFM FDDGGVSGRH SASSCTREEP LQEATCSDMY
201: NVPNHKQDEA DMPSLFDLVN SSMTYNNLPP LVDDMENTVT EEEAQPCCLG DNGEVSGESF EKKGLGEWLV PQQYSCLLSW DDVQSPIGDE TIITTSSSMA
301: TMDTTFPFPW Q
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
Arabidopsis Description
AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.