Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G304500.1 | Wheat | nucleus | 98.26 | 98.83 |
| TraesCS7D01G300000.1 | Wheat | nucleus | 97.68 | 98.25 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 95.94 | 97.07 |
| Os08t0151300-01 | Rice | nucleus | 71.01 | 68.25 |
| EES13346 | Sorghum | nucleus | 63.48 | 62.04 |
| Zm00001d024630_P002 | Maize | nucleus | 62.9 | 59.94 |
| GSMUA_Achr10P... | Banana | nucleus | 43.48 | 50.51 |
| VIT_02s0025g00320.t01 | Wine grape | nucleus | 43.48 | 49.34 |
| KRH77586 | Soybean | nucleus | 45.51 | 48.16 |
| KRH27893 | Soybean | nucleus | 45.22 | 48.0 |
| KRH41236 | Soybean | nucleus | 44.64 | 47.98 |
| KRH59965 | Soybean | nucleus | 43.48 | 46.88 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 42.03 | 46.62 |
| Solyc08g081500.1.1 | Tomato | nucleus | 42.32 | 44.11 |
| AT1G63910.1 | Thale cress | nucleus | 46.67 | 43.51 |
| Bra027771.1-P | Field mustard | nucleus | 45.8 | 43.17 |
| Bra027668.1-P | Field mustard | nucleus | 44.93 | 42.01 |
| TraesCS2B01G178000.1 | Wheat | nucleus | 23.48 | 41.54 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 27.25 | 33.45 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 28.12 | 33.11 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 27.54 | 32.99 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 27.54 | 32.87 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 26.96 | 32.52 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 27.83 | 31.48 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 24.64 | 31.02 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 24.35 | 30.66 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 27.54 | 30.65 |
| TraesCS7B01G244200.1 | Wheat | nucleus | 25.51 | 30.34 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 24.35 | 30.11 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 25.22 | 29.49 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 24.06 | 29.33 |
| TraesCS4B01G312100.1 | Wheat | nucleus | 22.03 | 29.12 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 23.19 | 28.17 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 24.35 | 27.27 |
| TraesCS2B01G252000.1 | Wheat | nucleus | 29.57 | 26.7 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 31.01 | 24.83 |
| TraesCS2B01G177900.1 | Wheat | nucleus | 25.8 | 24.65 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 25.22 | 22.31 |
| CDY70602 | Canola | nucleus, plastid | 2.9 | 6.41 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G204800.1 | EnsemblPlantsGene:TraesCS7B01G204800 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF451 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:375189753..375191995
Molecular Weight (calculated)
38004.7 Da
IEP (calculated)
6.457
GRAVY (calculated)
-0.562
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKAP AAPNVTTTTS STTSTSPPNN GLAPCSGSTA TSDVHHRRLQ HPTFSCAPAG DHLQLDAIIG HHQSTSLALP VAAGAGQEDS
201: PPGMSHHCPL FMFDTGVVST PFASAAAQQH PFIASFTAAM AEADTPSCYH LPPLVDGMGA MGMCMEAMDD HCGARAGMGN GCFGDEQRQR RRPELEEEEG
301: EQLGQHEQWD EEQLLMWDDQ EVLTPSNMEA MQSGAHSLLF MGPNA
101: DNEIKNYWNS WIKKKIRKAP AAPNVTTTTS STTSTSPPNN GLAPCSGSTA TSDVHHRRLQ HPTFSCAPAG DHLQLDAIIG HHQSTSLALP VAAGAGQEDS
201: PPGMSHHCPL FMFDTGVVST PFASAAAQQH PFIASFTAAM AEADTPSCYH LPPLVDGMGA MGMCMEAMDD HCGARAGMGN GCFGDEQRQR RRPELEEEEG
301: EQLGQHEQWD EEQLLMWDDQ EVLTPSNMEA MQSGAHSLLF MGPNA
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
Arabidopsis Description
AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.