Factsheet for TraesCS2B01G177900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G158200.1	Wheat	nucleus	93.91	97.13
TraesCS2A01G152700.1	Wheat	nucleus	94.74	94.21
TraesCS2B01G178000.1	Wheat	nucleus	42.11	77.95
Zm00001d022259_P002	Maize	nucleus	65.93	68.19
EER97608	Sorghum	nucleus	69.25	65.62
TraesCS7B01G244200.1	Wheat	nucleus	47.37	58.97
TraesCS3B01G286500.1	Wheat	nucleus	32.13	41.28
TraesCS1B01G383800.1	Wheat	nucleus	32.13	40.28
TraesCS1B01G383700.1	Wheat	nucleus	31.86	39.25
TraesCS1B01G383900.1	Wheat	nucleus	31.3	39.1
TraesCS4B01G312100.1	Wheat	nucleus	28.25	39.08
TraesCS1B01G383600.1	Wheat	nucleus	32.13	38.03
TraesCS3B01G224500.1	Wheat	nucleus	31.02	36.13
TraesCS2B01G387300.1	Wheat	nucleus	25.48	33.58
TraesCS2B01G387800.1	Wheat	nucleus	25.48	32.97
TraesCS2B01G387500.1	Wheat	nucleus	25.76	32.86
TraesCS2B01G387700.1	Wheat	nucleus	24.65	32.48
TraesCS6B01G265200.1	Wheat	nucleus	25.21	30.85
TraesCS1B01G100600.1	Wheat	nucleus	36.57	30.63
TraesCS3B01G280700.1	Wheat	nucleus	23.82	30.07
TraesCS3B01G109800.1	Wheat	nucleus	22.71	28.87
TraesCS6B01G053100.1	Wheat	nucleus	24.38	28.57
TraesCS2B01G252000.1	Wheat	nucleus	27.7	26.18
TraesCS7B01G204800.1	Wheat	nucleus	24.65	25.8
TraesCS5B01G105900.1	Wheat	nucleus	26.87	24.87

Protein Annotations

EnsemblPlants:TraesCS2B01G177900.1	EnsemblPlantsGene:TraesCS2B01G177900	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:152843210..152844722

Molecular Weight (calculated)

38341.3 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.455

Length

361 amino acids

Sequence
(BLAST)

001: MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSI PKIAGLERCG KSCRLRWINY LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT
101: DNEVKNFWNS FIKKKLRQRG IDPATHKPYA TAASAPPAAT PVSRSAVFSE AELILSSPVG GQHMPPLVSA ESYVYSRGSM DGAGGVVGGC SDDVSLSSLS
201: GYNNNNQTAD FAGYLDADAL HGGVIPSVSS SSTLNSMAGV SPGGAANTNA TTDELCCNNN PSNSGSGFES STTQSSSNHH LPWLELGSIS SCTEDASGAG
301: AGADHYGAAL DELKWSDYVF DGGYQQYHQQ GQCIYGDSKA AADAAAAQFD AHGLGINWCL N

Best Arabidopsis Sequence Match ( AT1G57560.1 )
(BLAST)

001: MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL

Arabidopsis Description

AtMYB50At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.