Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G255400.1 | Wheat | nucleus | 99.29 | 97.89 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 98.22 | 87.34 |
| Os01t0702700-01 | Rice | nucleus | 82.56 | 77.08 |
| EES03490 | Sorghum | nucleus | 81.85 | 73.25 |
| Zm00001d043729_P001 | Maize | nucleus | 56.94 | 69.87 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 68.33 | 66.67 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 67.62 | 64.85 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 66.19 | 64.36 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 69.04 | 63.61 |
| TraesCS2B01G178000.1 | Wheat | nucleus | 32.03 | 46.15 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 44.48 | 40.32 |
| TraesCS7B01G244200.1 | Wheat | nucleus | 39.5 | 38.28 |
| PGSC0003DMT400069644 | Potato | nucleus | 41.99 | 37.46 |
| Solyc06g071690.2.1 | Tomato | nucleus | 42.7 | 37.38 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 40.93 | 37.1 |
| PGSC0003DMT400046645 | Potato | nucleus | 41.99 | 36.31 |
| Solyc03g112390.2.1 | Tomato | nucleus | 41.99 | 36.31 |
| TraesCS4B01G312100.1 | Wheat | nucleus | 33.45 | 36.02 |
| KRH57123 | Soybean | nucleus | 47.33 | 35.95 |
| KRH63612 | Soybean | nucleus | 45.91 | 35.93 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 46.26 | 35.81 |
| KRH03235 | Soybean | nucleus | 45.55 | 35.36 |
| KRH54334 | Soybean | nucleus | 45.2 | 34.89 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 32.38 | 33.21 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 32.03 | 32.26 |
| TraesCS2B01G177900.1 | Wheat | nucleus | 41.28 | 32.13 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 31.32 | 32.12 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 32.03 | 31.47 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 31.67 | 31.45 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 31.67 | 30.17 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 45.91 | 29.93 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 31.67 | 28.9 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 29.18 | 28.87 |
| TraesCS7B01G204800.1 | Wheat | nucleus | 33.45 | 27.25 |
| TraesCS2B01G252000.1 | Wheat | nucleus | 34.16 | 25.13 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 34.52 | 24.87 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 36.65 | 21.73 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G286500.1 | EnsemblPlantsGene:TraesCS3B01G286500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF597 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:458342862..458343922
Molecular Weight (calculated)
30856.8 Da
IEP (calculated)
5.787
GRAVY (calculated)
-0.634
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHAGTGGG GGVQQKLRKG LWSPEEDEKL YNHIIRYGVG CWSSVPKLAG LQRCGKSCRL RWINYLRPDL KRGSFSQQEE DAIVGLHEIL GNRWSQIASH
101: LPGRTDNEIK NFWNSCLKKK LRQRGIDPST HKPISGVVGV EPDQASKDER PQAADGLALK QQQVFDPFPV ADTFGAGFDG AGMPLYDHLG GKDAAGFVDY
201: SSVLDVSENL GYGESSSNSS NWNSAPEASN ALEGEALHWA SESKVEPFAG YAGDEDDKFA LPCHGQQEHS MAHFDFNLEY F
101: LPGRTDNEIK NFWNSCLKKK LRQRGIDPST HKPISGVVGV EPDQASKDER PQAADGLALK QQQVFDPFPV ADTFGAGFDG AGMPLYDHLG GKDAAGFVDY
201: SSVLDVSENL GYGESSSNSS NWNSAPEASN ALEGEALHWA SESKVEPFAG YAGDEDDKFA LPCHGQQEHS MAHFDFNLEY F
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.