Factsheet for HORVU1Hr1G079030.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011669_P001	Maize	nucleus	19.62	38.75
TraesCS3B01G286500.1	Wheat	nucleus	21.73	36.65
TraesCS3D01G255400.1	Wheat	nucleus	21.73	36.14
Os01t0702700-01	Rice	nucleus	22.78	35.88
HORVU1Hr1G079040.4	Barley	nucleus, plastid	25.53	34.38
EES03490	Sorghum	nucleus	22.57	34.08
TraesCS3A01G254500.1	Wheat	nucleus	21.73	32.59
HORVU3Hr1G047290.2	Barley	nucleus	18.14	28.38
PGSC0003DMT400069644	Potato	nucleus	16.67	25.08
Solyc03g112390.2.1	Tomato	nucleus	17.09	24.92
Solyc06g071690.2.1	Tomato	nucleus	16.88	24.92
HORVU3Hr1G066860.11	Barley	nucleus	15.4	24.83
PGSC0003DMT400046645	Potato	nucleus	16.88	24.62
VIT_17s0000g09080.t01	Wine grape	nucleus	18.57	24.24
HORVU7Hr1G082020.1	Barley	nucleus	17.51	23.71
HORVU2Hr1G091590.1	Barley	nucleus	14.98	23.36
KRH57123	Soybean	nucleus	18.14	23.24
KRH03235	Soybean	nucleus	17.51	22.93
KRH63612	Soybean	nucleus	17.3	22.84
KRH54334	Soybean	nucleus	17.51	22.8
GSMUA_AchrUn_...	Banana	plasma membrane	14.77	22.58
HORVU6Hr1G007010.2	Barley	nucleus	14.56	22.04
HORVU3Hr1G016940.1	Barley	nucleus	13.29	22.03
HORVU7Hr1G072450.2	Barley	nucleus	15.82	21.99
HORVU6Hr1G060610.3	Barley	nucleus	13.92	21.43
HORVU1Hr1G017970.4	Barley	nucleus	18.35	20.28
HORVU6Hr1G060600.2	Barley	mitochondrion	9.49	20.18
HORVU2Hr1G051030.3	Barley	nucleus	14.35	17.8
HORVU2Hr1G051010.1	Barley	nucleus, plasma membrane	14.13	17.54
HORVU5Hr1G027750.1	Barley	nucleus	15.4	15.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A287GE22	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	EnsemblPlantsGene:HORVU1Hr1G079030	EnsemblPlants:HORVU1Hr1G079030.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF466	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000B48488B	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:522193460..522195555

Molecular Weight (calculated)

52923.1 Da

IEP (calculated)

12.493

GRAVY (calculated)

-0.724

Length

474 amino acids

Sequence
(BLAST)

001: AARHRPQVSS TPIHCLCIAS SLLDRCLTSL PLPLPLPRRV SLRFFSPTLP PYIPDHPPGG SNRRSITPTA IASVHPRCLP SPAHHPGAES TDRMGRPSSG
101: AVGQPKVRKG LWSPEEDEKL YNHIIRHGVG CWSSVPRLAA LNRCGKSCRL RWINYLRPDL KRGCFSQQEE DHIVALHQIL GNRSVHLRIH GAMRPFPVAV
201: SRFGFAMRGD RSSRVDADAC VRAGGLRSRR TCRAGRTTRS RTSGTAASRR SSGSRASTRP RTSPWPPRTR QRQRPHCRTQ KRKTVSPFAR RSTAASFRSS
301: RRCSTRSRCA STTAPGSPRN SAWRTLRHCM ASSAAGRRSR TTTPGSAPRT TAACWTCRRT WATGRARATA ATGTTAARWA ACWTARCRTG PRRSRPSRRW
401: RGSSSTHRRS RSFRCPAKNR ASSQVSISTW NWNHTSEIPP SFFPPFFTFL NHITISNHVY SHVNRMARIH PKAN

Best Arabidopsis Sequence Match ( AT1G57560.1 )
(BLAST)

001: MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL

Arabidopsis Description

AtMYB50At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.